| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4387 |
|---|
| Symbol | |
|---|
| ID | 5422009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4862541 |
|---|
| End bp | 4864814 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640883650 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001419265 |
|---|
| Protein GI | 154248307 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGCGC GCGACACGGA GAAAGCTCCG GACGCCTTCC GGACCATCAG CGAGGTCGCC
GACGACCTGG CCCTTCCGCA GCACGTCCTG CGCTTCTGGG AGACCCGTTT CCCCCAGATC
AAGCCCATCA AGCGGGCCGG CGGCCGGCGC TTCTACCGGC CGGAGGACGT GGACCTCCTG
CGCGGCATCC GCCACCTGCT TTATACCGAC GGCTTCACCA TCAAGGGCGC GCAACGCATC
CTGAAGGATC AGGGCGTGCG CTACGTGCAG GATCTCGGCA TCGAGCGCGA GGTAGCGGTC
ATGCGCTCGG CCAAGCCCGC GCGCGGCGAG GCCGGTGACG GCGTCACCTT CGGCGGCCTG
CTCGGACTTC TGCCCCGCCG CCGGCCCAAG GCACAGGGTG GCAGGGCAGG GGAGGACGAC
GACCTCCTCC CCGAGTTGCC CGAAGCAGCC GAACTGCCCC TGCCTTTCCC TGATGCGGAG
GCCGACCGCG ATCTCGCGGA CGAACCGCCC GAGCCCCCCA TCGCCTTCCG GCCCGCTGGC
CGGCACCGCG AGCGCGAGCC CCAACTTCGG GATGAGCGAC GCGCCGCCGC GTTCGAGGCG
CCGGGCCAGC GACGCGAGCC GACCCTGGGC GAGGACCTAC CGCTTCCGCC CTCCGGCGGT
CCACATGGGG CACGAGAGGG CGCGCCACCG CGAACGCGGG AGCGCGTGGA GCCCGTCCTC
GCCCCTCAGC GGCCGAGCCG GGGCCCCGCC GCGCGCGTAT CCCAGCGGGA TGCCGAGGGC
ATGGCGGCAC CGTCCCATCC GCCTGCTTTC GACGACCCGC TGCTGCCATT CCTCGACGAC
ACGCCGGTGA CGGTCTCCGC CGTGTCCGAG CCCATCGAGG CGCGCATCCA GCGCCTGCGC
GCGCAGGAAC GCCGTCCCAT GCGCCCGCAC GAGACACTGG AGGAGGTTGA GGGCCCCGGA
GAGGACATCC AGCCGCACGA GCGCCGCGCG CCATCGCCGC TGGACCTCCC GCATGAGGAG
GCGGCGACGA TGCGTGCCGC CCCGCGCCGT TCTTCCGCAC CCGCCGAGGC CCGGCGCCCG
GCATGGGAGG ACGAGGAGCG ATTGGACGAC GAGCGATTGG ACGACGAGCC GTTCGACGAC
CCGTTTTCCC CCCATCCCCG CCGCAGCCCT CAATCCAAAT CCTATGAGCA TGATGGCAAC
CCGCCTGCGC TGGCGCCGCA ACGGCGGGCC GCGGCGGCCG CACGCTCGGA GCCGCGGTTC
CATGAGCCCG GGTTCCAGGA GCCGGCCCAA GAGCCGCGCC GGGATGCGCG CCAGGATCCA
CGCCAGAGCC GGATCGTGCA GGATGGCGAA TGGCGGCAGA CCGATTGGGT GGAGGCCACA
TGGCACGGCG CAGCCGAGAA CCCCGCCGGC CTGCCGGGGA CCGAAGCCCG ATCCGAAGAG
GATGAGCCGC TTTATCGCCC CATCGAACGG CCGTCGCGCG CCCAGCAGCG CCATTCCGCC
ATGGCCGCCG ATCCGGAGAC CGAGATGATG AACGAGGAGC GGCGCCGCAC CCCACTTTCG
CCGCCCCGTG GTGAGTGGCG CGAGCCTTCC ATGAGTGCAG CGCCGCCCAT GAGCGCGCCG
CCCATTGGCC CCTCGGCAGG TCGTGCGCCG ATGGCCCATG CGCCTGCCGC AGGAGCATCG
GCGGTGCCAG CGCACGCCCG GCCTCCGGCT GGTTGGGCTG ACGAGGAGGT GCGGCGGGTG
TGGGACGAAG GCTGGGGCGA GGGCGCACCG CAGTCCCTGC CGCGGGCAAG CCGGGTCGGG
CCGCTCATCG GTCCGATCCA AGACGAGGAT GACCCGAACT CGGGCGTGCT GCCCGAGTCG
GAGCAGCGCC GCATCGCCGA GCGCATGTCC GGCCGGGCCG TCGCCCCCGA TCCCTATGTG
GCGCAGCGGC GTGGCCCGCC GCCCTGGAGC CGGGCCGAGG CGCCCGTAGA CCTGCCCAAT
CCGTCCTTCC GCGACGGATC GGCGAGGGCG GAGGCGCCCG CCTATGCCCC TGAACCGGAG
CCACCGGCTC AGAGGGTGCC GCGCGAGCCG CTGCGTTCAG GTCCGCCCGA GCAATATCTG
CCGCCGCATC TGCGGTCGGA GCCACGGATG GCGGGCCAGC CGCCGATGGC CGCGCCTGTG
CTCTCGCGCG ATGACGTGCA CCGCATGCAA TCGGCGCTCT ATGAGCTCGG CGAATGCCGG
CGGCTGATGG AAGAGGTTCT GGCGCCCCGG GACACCGAGC GTCCGGGCGA GTGA
|
|---|
| Protein sequence | MDARDTEKAP DAFRTISEVA DDLALPQHVL RFWETRFPQI KPIKRAGGRR FYRPEDVDLL
RGIRHLLYTD GFTIKGAQRI LKDQGVRYVQ DLGIEREVAV MRSAKPARGE AGDGVTFGGL
LGLLPRRRPK AQGGRAGEDD DLLPELPEAA ELPLPFPDAE ADRDLADEPP EPPIAFRPAG
RHREREPQLR DERRAAAFEA PGQRREPTLG EDLPLPPSGG PHGAREGAPP RTRERVEPVL
APQRPSRGPA ARVSQRDAEG MAAPSHPPAF DDPLLPFLDD TPVTVSAVSE PIEARIQRLR
AQERRPMRPH ETLEEVEGPG EDIQPHERRA PSPLDLPHEE AATMRAAPRR SSAPAEARRP
AWEDEERLDD ERLDDEPFDD PFSPHPRRSP QSKSYEHDGN PPALAPQRRA AAAARSEPRF
HEPGFQEPAQ EPRRDARQDP RQSRIVQDGE WRQTDWVEAT WHGAAENPAG LPGTEARSEE
DEPLYRPIER PSRAQQRHSA MAADPETEMM NEERRRTPLS PPRGEWREPS MSAAPPMSAP
PIGPSAGRAP MAHAPAAGAS AVPAHARPPA GWADEEVRRV WDEGWGEGAP QSLPRASRVG
PLIGPIQDED DPNSGVLPES EQRRIAERMS GRAVAPDPYV AQRRGPPPWS RAEAPVDLPN
PSFRDGSARA EAPAYAPEPE PPAQRVPREP LRSGPPEQYL PPHLRSEPRM AGQPPMAAPV
LSRDDVHRMQ SALYELGECR RLMEEVLAPR DTERPGE
|
|---|
| |