Gene Xaut_4380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4380 
Symbol 
ID5422965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4856997 
End bp4857761 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID640883643 
ProductTriose-phosphate isomerase 
Protein accessionYP_001419258 
Protein GI154248300 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCTT CCCGCCGCGT CCTGATCGCC GGCAACTGGA AAATGAACGG GCTGAAGAGC 
TCCCTCGCCG AGATCGAGGC CCTGGCCGCG GGCTATGATG GCGACCTCAA GGCCAAGCTG
GACCTGCTGG TCTGCCCGCC CGCAACGCTC CTGATCTCCG CCGCCGAGCG CCTCGCCGGC
TCCGGGGTGC AGCTGGGCGG CCAGAATTGC CATCCGGCCC CCGCGGGCGC CCACACCGGC
GGCATTTCCG CCGAGATGCT GAAGGATGCC GGCGTCACGT CGGTCATCGT CGGCCATTCC
GAGCGTCGCA CCAACCTGTC GGAGAGCGAT GCGGTGGTGA TGGCCAAGGT GAAGGCGGCG
TGGTGCTTCG GGTTGCTGCC CATCGTCTGC GTCGGCGAGA CCGCCGAGGA GCGCGATGCC
GGCGAGGCCG TGGGGGTGGT GACGCGCCAG GTGCACCAGT CGCTGCCGGA AGGCTGCACC
GCATCCAACC TGGTCATCGC CTACGAGCCG GTCTGGGCCA TCGGCACCGG CCGCACGCCC
ACCCCTGAGG ACGTGGCCAA CATCCATGGC ACCATCCGCT CCGTGCTCCG CTCACAGTTC
GGCGCCGAGG CTGACGGTAT TCGCATCCTC TACGGCGGCT CGGTGAAGCC AGACAATGCG
GCGACCCTGA TGGCCGTTGC CGATGTGGAC GGCGCACTGG TGGGAGGCGC CAGCCTGAAG
GCAGCGGATT TCCTCGCCAT CGCCCGGGCC ACCCCGGCGC GGTGA
 
Protein sequence
MPASRRVLIA GNWKMNGLKS SLAEIEALAA GYDGDLKAKL DLLVCPPATL LISAAERLAG 
SGVQLGGQNC HPAPAGAHTG GISAEMLKDA GVTSVIVGHS ERRTNLSESD AVVMAKVKAA
WCFGLLPIVC VGETAEERDA GEAVGVVTRQ VHQSLPEGCT ASNLVIAYEP VWAIGTGRTP
TPEDVANIHG TIRSVLRSQF GAEADGIRIL YGGSVKPDNA ATLMAVADVD GALVGGASLK
AADFLAIARA TPAR