Gene Xaut_4357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4357 
Symbol 
ID5424547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4830443 
End bp4831357 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID640883619 
Productcatechol 1,2-dioxygenase 
Protein accessionYP_001419235 
Protein GI154248277 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID[TIGR02439] catechol 1,2-dioxygenase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG CCGCCATCGA TGCCCTCTTG AAGGAGATGC AGGCGCCTAC CCGCGGCGAG 
CCCACGCCCC GCGTGAAGGC GATCGTGGAC CGCATCGTCC GCGACCTGTT CTACGTCATC
GACGAATATG ACGTGGAGCC GAGCGAGTTC TGGAGCGCGG TCAACTACCT GACGCAGGCC
GGCCGCAACG ACGAGTATGG CCTGATTGCC GCTGGCCTCG GCTTTGAGCG CTTTCTCGAC
GTGCGGCTCG ACGCAGCGGA GGAAGCTGCC GGCCTTACCG GCGGCACCCC GCGCACCATC
GAGGGGCCGC TCTATGTGGC CGGCGCGCCC CTGTGCAAAG GCGAGGCGCG GCTCGACGAC
GGCTCGGAAG AGGGCGAGAT CCTCATCATG CACGGGCAGG TGCGCGACAC CGACGGCCGC
CCGGTAGCTG GCGCACATGT GGAGGTGTGG CACGCCAACA CGCGGGGCAA TTACTCCTTT
TTCGACAAGA GCCAGAGCCC CTTCAACCTG CGTCGGACCA TCGAGACCGA CGCCGATGGC
CGCTACCGTT TCCGCACCAC GATGCCATCG GGCTATGCGG TGCCCCCCGA AGGCTCCACC
GACACGCTGC TGAAGCAGCT CGGCCGCCAC GGGCACCGTC CGGCGCACAT CCATTTCTTC
GTGAGCGCGC CGGGCTTTCG CAAGCTCACG ACGCAGATCA ACATCGACGG CGATCCCTAT
CTCCACGATG ACTTCGCCTT CGCCACCCGC GATGGGCTGA TCCCCGCCGT GGAGCGCAAC
CAGGACCCCG ACGCCATCGC CGAGGCCGGG CTGAATGCCC CGTTCGCGCG CATCGCCTTC
GATTTCGAGC TGAGGTCGGA GGCCCTCGCC CTGCCCTCCG CCGAGGTGCA GCGCCCGCGC
GCGGAAGCCG CCTGA
 
Protein sequence
MEKAAIDALL KEMQAPTRGE PTPRVKAIVD RIVRDLFYVI DEYDVEPSEF WSAVNYLTQA 
GRNDEYGLIA AGLGFERFLD VRLDAAEEAA GLTGGTPRTI EGPLYVAGAP LCKGEARLDD
GSEEGEILIM HGQVRDTDGR PVAGAHVEVW HANTRGNYSF FDKSQSPFNL RRTIETDADG
RYRFRTTMPS GYAVPPEGST DTLLKQLGRH GHRPAHIHFF VSAPGFRKLT TQINIDGDPY
LHDDFAFATR DGLIPAVERN QDPDAIAEAG LNAPFARIAF DFELRSEALA LPSAEVQRPR
AEAA