| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4352 |
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| Symbol | |
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| ID | 5424661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4822820 |
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| End bp | 4823929 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640883614 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001419230 |
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| Protein GI | 154248272 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.285703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCG CCCGTGCTGC CCGCATCGTT TCGCTGCTGT TGCTCGGTCT CCTATCTCCA
TGCGTTGCGC GCACCCAGGA GGGCGGCATT CCGGTGGGCG TCGTTCCTGC CGCGCTCAAG
CCCATCTCCG ACGCCATGGA ATTCGTCGGC CGCGTGGAGG CGCCCGAACG CGTCGAGATC
CGCGCCCGGG TGAAGGGCAT GCTGGAAGCC GTCTTGTTCA AGGAGGGCGA GACGGTGAAG
GAGGGCGCAC CACTCTACCG CATCGAGAAG CCGCTGTTCC AGGCGGATGT GGAGAATGCC
GAAGGCAACG TGGAGCGGGC CAAGGCCGCC CTGAGCCTGG CCAAGATCCA GCGCGAGCGC
GCCGAGGAAC TGGTCGCGAA GAATGCCGGC ACGGTGGTGG CCCGCGACCA GGCGGTGGCG
AACGAGGAAT CCTCCAAGGG CGCGCTGCTG TCCGCCGAAG CCAGCCTCCA CACCACGCAG
ATCAATCTCG GCTACACCGA CATCGTCTCC CCCATCACCG GCCGCATCGG CCGCTCGGCC
GTCACCCGCG GCCACATCGT GGGTCCGGAG AGTGGCGTGC TCGCCACCGT GGTGAGCCAG
GATCCCATGT ACGTCACCTT CCCCGTCAGC CAGCGCGACT ATCTGGAGGC GCAGAAGGAC
GAGGGGAAGG TGGACCTCGC CAACGTGGAA GTGCGCATCA AGTTCTCCGA TGGCGCGGTC
TATGGCGAGG TGGGGCGGGT GAATTTCGTG GACGTGTCGG TCAACCGCAC CACCGACACC
ATGATCCTGC GCGCCGACGT GCCCAACCCG AGCGGCAAGC TGGTGGACGG CCAGCTTGTC
CGTGTGGAGC TGAAGGCGGG GACGCCGGAA GAACGGGTGG TGATCCCGCA GGCGGCGCTG
ATCGCCGACC AGGCCGGCGT CTATGTGTTC GTGGTGGAGA ACGGCAAGGC TGTGGTGCGC
CGGGTGAAAA CCGGCGCCAC CCAGGGGCCG AACATCATCA TCACCGACGG CGTGAAGGCC
GGCGAGCCGG TCATCGTGGA GGGCTTCGAG AGCCTGAAGC CCGGCATCGC GGTGCGCGCG
ATCCCGACGG CCATCGGCCT GAAAGGCTGA
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| Protein sequence | MSRARAARIV SLLLLGLLSP CVARTQEGGI PVGVVPAALK PISDAMEFVG RVEAPERVEI
RARVKGMLEA VLFKEGETVK EGAPLYRIEK PLFQADVENA EGNVERAKAA LSLAKIQRER
AEELVAKNAG TVVARDQAVA NEESSKGALL SAEASLHTTQ INLGYTDIVS PITGRIGRSA
VTRGHIVGPE SGVLATVVSQ DPMYVTFPVS QRDYLEAQKD EGKVDLANVE VRIKFSDGAV
YGEVGRVNFV DVSVNRTTDT MILRADVPNP SGKLVDGQLV RVELKAGTPE ERVVIPQAAL
IADQAGVYVF VVENGKAVVR RVKTGATQGP NIIITDGVKA GEPVIVEGFE SLKPGIAVRA
IPTAIGLKG
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