| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4334 |
|---|
| Symbol | |
|---|
| ID | 5424323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4806708 |
|---|
| End bp | 4807733 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640883596 |
|---|
| Product | choloylglycine hydrolase |
|---|
| Protein accession | YP_001419212 |
|---|
| Protein GI | 154248254 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3049] Penicillin V acylase and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.684328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.468058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCACCC GTGTTGTCTA TCTCGGGCCC AACGGAAATA ACCTGACGGC CAGGTCCATG
GACTGGAAAG ACGACATCGG CACCAATCTG TGGATCTTCC CGCGGGGCAT GGTGCGCGAC
GGCAAGGCTG GTCCGAACTC CCTGACCTGG ACGTCCAGAT ACGGCAGCGT CATTGCGTCG
GGCTACGACA TCGCCACCAC CGATGGCCTG AATGAAGCAG GATTGTCGGC CAACCTGCTG
TGGCTGGTGG AATCGGAATA TCCAGCCCTC GACAAGGCCA GGCCCGGGCT CTCCATCGCA
GCCTGGGCGC AATATGTGCT CGACAGTTTC GCCACCGTGA AGGAGACCGT CGACGCCCTG
AAGGATGAGC CGTTCATCCT TGTAACCGAC GGCGTTCCGG GCGAAAAACG CCTTGCCACC
CTGCATCTGT CCATTTCCGA CAAGAGCGGC GACAGCGCGA TCATCGAATA TATCGGCGGC
CGCCAGGTCA TTCATCATGA TCGCAGCTAT CAGGTGATGA CCAACTCCCC GGTCTTCGAA
AAACAGCTCG CGCTGAACGA GTATTGGCAG CAGATCAGCG GCACCGTGAT GTTGCCCGGA
ACCAACCGCG CGGCGGATCG CTTTGCCCGT GCTTCGTTCT ATGTGAATGC CATTCCGAAG
GTGGAAGATC CCAAGGTTTC CCTTGCGGGG GTGTTCAGCG TGATCCGCAA CGTGTCGGTG
CCATTGGGCA TTTCGACACC CAATGAGCCG AATATTTCCT CCACGCGCTG GCGCACCGTG
GCCCACCACC ACCAGAATCT CTATTTTTTC GAATCGGCGC TGGCGCCGAA CATCTTCTGG
ATCGATCTCG CTCAGGTAGA CTTCTCAGCG GAGACTGGAA CGGTCCGCAA GCTTGATCTG
GGACCCAACC AGGGCAACAT TTTTTCGGGC GAGGTGAGCA GCGCTTTCGC GCCAAGCGCG
CCCTTTGCCT TCCTCGGACC CGGCGCCGGG CCGACGCCGC CTCAGCCCGA ACCCTCGGGG
CCATAG
|
|---|
| Protein sequence | MCTRVVYLGP NGNNLTARSM DWKDDIGTNL WIFPRGMVRD GKAGPNSLTW TSRYGSVIAS
GYDIATTDGL NEAGLSANLL WLVESEYPAL DKARPGLSIA AWAQYVLDSF ATVKETVDAL
KDEPFILVTD GVPGEKRLAT LHLSISDKSG DSAIIEYIGG RQVIHHDRSY QVMTNSPVFE
KQLALNEYWQ QISGTVMLPG TNRAADRFAR ASFYVNAIPK VEDPKVSLAG VFSVIRNVSV
PLGISTPNEP NISSTRWRTV AHHHQNLYFF ESALAPNIFW IDLAQVDFSA ETGTVRKLDL
GPNQGNIFSG EVSSAFAPSA PFAFLGPGAG PTPPQPEPSG P
|
|---|
| |