Gene Xaut_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4290 
Symbol 
ID5423674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4757855 
End bp4758892 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content70% 
IMG OID640883551 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_001419168 
Protein GI154248210 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAC CGAACCACCC CATCCGCCGC GTCGCCGTCA TCGGAGCCGG GACCATCGGC 
GCGAGCTGGG CTGCGCTGTT CCTCGCGCGC GGGCTCGACG TGGTGGTGAG CGACCCCGCG
CCGGGCGCGG CCGAGGCCAC CCAGAGCCTC ATCTCGGCCG CCTGGCCGAT TCTGATGGAA
CTGGGCGGCG AAGGCGCGAT CGACCCCACC AGCTGGCGCT TCGAGCCGGA CCCGGTAAAG
GCGGTGGCGG GCGTCGACTT CGTGCAGGAG AACGCGCCCG AGCGCTACGA GTTGAAGCAG
AAGCTGTTTC CCGCCATCGA CGCGGTGCTG CCGCCGGAGG TGGTGATCGC CTCGTCTTCC
TCAGGCCTGC TGGTGAGCCG CATCGCCGAG GGCTGCCGGC ATCCCGAGCG CTGCATCATC
GGCCACCCCT TCAATCCCCC GCACCTCATT CCGCTGGTGG AGGTGGTGGG CGGCGAGAAG
GCAAGCCGCG CCGCCATCGA AACCGCCATG GATTTCTACC GGGCCATGGG CAAGCACCCC
ATCGAGATCC ACAAGGAGGT CGCCGGCCAT GTGGCCAACC GCCTGCAGGC GGCGCTGTGG
CGCGAGGCCA TCCATCTGGT GGAGCAGGGC GTGGTTTCGG TGGCGGACGT GGATGCGGCG
GTCTCGGAAG GCCCCGGCCT GCGCTGGGCG CTCATGGGCC AGCACATGAC CTTCCACCTC
GGCGGCGGCG CGGGCGGCCT CGCCCATTTC ATGCACCACC TTTTGCCGGC GGTGGAAACC
TGGTGGGACG ATCTCGGCAC GCCGAAAGTG ACGCCGGAGC TTCAGGCGAA GCTGGTGGAA
GGGGTGACGG AGGAAGCCGG CGGCCGGTCC ATCGCCGAAC TGGCGCAGCG GCGCGACACC
CTGCTGACAC AGATCGTGGC GCTGAAGCGC GCCCATGATG CGGTGGAGGA GAAGCAGGAC
CTGAGCGAGC GGCTCGACGA GGCGCTGGAG GAGAGCTTCC CGGCCAGCGA CCCGGTGGCG
GTGCACAAGG CGGACTGA
 
Protein sequence
MSQPNHPIRR VAVIGAGTIG ASWAALFLAR GLDVVVSDPA PGAAEATQSL ISAAWPILME 
LGGEGAIDPT SWRFEPDPVK AVAGVDFVQE NAPERYELKQ KLFPAIDAVL PPEVVIASSS
SGLLVSRIAE GCRHPERCII GHPFNPPHLI PLVEVVGGEK ASRAAIETAM DFYRAMGKHP
IEIHKEVAGH VANRLQAALW REAIHLVEQG VVSVADVDAA VSEGPGLRWA LMGQHMTFHL
GGGAGGLAHF MHHLLPAVET WWDDLGTPKV TPELQAKLVE GVTEEAGGRS IAELAQRRDT
LLTQIVALKR AHDAVEEKQD LSERLDEALE ESFPASDPVA VHKAD