Gene Xaut_4252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4252 
Symbol 
ID5423000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4717931 
End bp4720102 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content68% 
IMG OID640883513 
Productmalate synthase G 
Protein accessionYP_001419130 
Protein GI154248172 
COG category[C] Energy production and conversion 
COG ID[COG2225] Malate synthase 
TIGRFAM ID[TIGR01345] malate synthase G 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.158916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGTG GGACCGAGGC CCGGGTGGAA CGCGCCGGGC TGCAAATCGC GCGTACTCTG 
CACGACTTCA TTGAAACCGA GGCATTGCCC GGCAGCGGCA TCGAGGCGGA CGTCTTCTGG
GAGGGCCTTT CCGCCATCGC CCACGACCTG GCACCGCGCA ACCGCGAACT CCTGGCGCGG
CGCGAGGAGC TGCAGAAGAC CCTCGACCAG TGGTATCGCG ACAATGGCAC CCCCCTCGAT
CTGGAGGCCT ACAAGGCCTT CCTGACAAAG ATCGGCTATC TGGTGCCCGA AGGCCCCGCC
TTCAGCGTGA CCACGGCCAA TGTGGACCCC GAGATCGCCG AAGTGGCCGG CCCGCAGCTG
GTCGTGCCGG TGATGAACGC GCGCTACGCG CTGAATGCCG CCAATGCGCG CTGGGGCTCG
CTCTATGACG CGCTCTACGG CACCGACGCC ATCCCCGAGA CCGACGGCGC CGAGAAGGGC
AAGGGCTACA ATCCCGTCCG CGGCGCCAAG GTCATCGCCT GGGGCCGCGC GTTCCTCGAC
GAGAGCGCGC CCCTGAAGGC CGGCTCCTGG GCCGATGCCG GTCCGCTGTC GGTCAAGGAC
GGCGCCCTTG CGGTCGGCGC CACCGGCCTT GCGGACCCGT CCCAGTTCGC CGGCTATCGG
GGCGAGGCCT CGGCGCCGTC CGCCGTGCTG CTGAAGAAGA ACGGCCTCCA TGTGGAGATC
GTGGTGGACC GCGCCAGCGT CATCGGCAAG GACGATACCG CCGGCATCTC CGACCTGGTG
CTGGAAGCCG CCCTCACCAC CATCCAGGAC TGCGAGGATT CCGTCGCCGC CGTGGATGCG
GAGGACAAGG TCGCGGTCTA CCGCAACTGG CTCGGCCTGA TGAGCGGCGA CCTCAAGGAG
GAGATCGCCA AGGGCGGGCG CATCTTCACC CGCAGCCTGA ATCCCGACCG GGAATATACC
GCGCCGGACG GCTGCACCCT GGTGCTGCCG GGCCGCTCGC TCATGCTGGT GCGCAACGTG
GGCCACCTCA TGACCAATCC GGCCATCCTG CTGAAGGACG GCTCGGAAAT CCCCGAGGGC
ATCATGGATG CCGCCGTCAC CGCGCTCATC GCCCTGCGCG ACATCGGCCC CAACGGACGC
CGCGCCAACA GCCGCGCCGG CTCCATGTAT GTGGTCAAGC CCAAGATGCA CGGGCCGGAA
GAGGTGGCGT TCGCGGTGGA GATCTTCGAC CGCGTCGAGG ATCTGCTGGG CCTGCCCAGC
GACACCATCA AGATGGGCAT CATGGACGAG GAGCGCCGCA CCACGGTGAA CCTGAAGGAG
AGCATCCGCG CCGCATCCAG CCGGGTTGCC TTCATCAACA CCGGCTTCCT CGACCGCACC
GGCGACGAGA TCCACACTTC CATGGAAGCC GGCCCCATGG TCCGCAAGGG CGACATGAAG
CAGGCTGCCT GGATCAGCGC CTACGAGGCC CGCAACGTGG ACATCGGCCT GGAGTGCGGC
CTTGCCGGCC ATGCCCAGAT CGGCAAGGGC ATGTGGGCCA TGCCGGACCT GATGGCCGCC
ATGCTTGAGC AGAAGATCGC CCACCCCAAG GCCGGCGCCA ACACCGCCTG GGTGCCGTCG
CCCACTGCCG CCACCCTGCA CGCCACCCAC TATCACAAGG TGGACGTGCA TCAGGTGCAG
GCCGCGCTGC GCAGCCGCCC GAAGGCCAAG CTGGACGATC TCCTGACCAT CCCGGTGGCG
GTGCGGCCGA ACTGGACGCC CGAGGACATC CAGCACGAGC TGGACAACAA TGCCCAGGGC
ATCCTCGGCT ATGTGGTGCG CTGGGTCGAC CAGGGCGTCG GCTGCTCCAA GGTGCCGGAC
ATCCACGACG TGGGCCTGAT GGAGGATCGC GCCACCCTGC GCATCTCCGC CCAGCACATG
GCTAACTGGC TGCGCCACGG CGTGTGCAGC GAGGCGCAGG TGCTGGAGAC ACTGAAGCGC
ATGGCGGCGG TGGTGGACCG GCAGAATGCC GGCGATCCGC TCTACCGGCC CATGGCGCCG
GACTTCACCT CCATCGCCTT CCAGGCCGCC TGCGACCTCG TCTTCAAGGG CCGCGAGCAG
CCGAGCGGCT ACACCGAGCC GCTGCTCCAC CAGCGCCGGC TGGAGCTGAA GGCGCAGAGC
GCCGCGGCCT GA
 
Protein sequence
MASGTEARVE RAGLQIARTL HDFIETEALP GSGIEADVFW EGLSAIAHDL APRNRELLAR 
REELQKTLDQ WYRDNGTPLD LEAYKAFLTK IGYLVPEGPA FSVTTANVDP EIAEVAGPQL
VVPVMNARYA LNAANARWGS LYDALYGTDA IPETDGAEKG KGYNPVRGAK VIAWGRAFLD
ESAPLKAGSW ADAGPLSVKD GALAVGATGL ADPSQFAGYR GEASAPSAVL LKKNGLHVEI
VVDRASVIGK DDTAGISDLV LEAALTTIQD CEDSVAAVDA EDKVAVYRNW LGLMSGDLKE
EIAKGGRIFT RSLNPDREYT APDGCTLVLP GRSLMLVRNV GHLMTNPAIL LKDGSEIPEG
IMDAAVTALI ALRDIGPNGR RANSRAGSMY VVKPKMHGPE EVAFAVEIFD RVEDLLGLPS
DTIKMGIMDE ERRTTVNLKE SIRAASSRVA FINTGFLDRT GDEIHTSMEA GPMVRKGDMK
QAAWISAYEA RNVDIGLECG LAGHAQIGKG MWAMPDLMAA MLEQKIAHPK AGANTAWVPS
PTAATLHATH YHKVDVHQVQ AALRSRPKAK LDDLLTIPVA VRPNWTPEDI QHELDNNAQG
ILGYVVRWVD QGVGCSKVPD IHDVGLMEDR ATLRISAQHM ANWLRHGVCS EAQVLETLKR
MAAVVDRQNA GDPLYRPMAP DFTSIAFQAA CDLVFKGREQ PSGYTEPLLH QRRLELKAQS
AAA