| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4235 |
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| Symbol | |
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| ID | 5422185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4695828 |
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| End bp | 4697219 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640883496 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001419113 |
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| Protein GI | 154248155 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.902691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.529157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTTG CGAGACTCGT TCGCCGAAAC GGATATGCAA TTTTGGCGGG GGCCAGCATC
ATCGTCCTCG GCATGGGGAG CGCGTCCGCA CAGTCTCTCG ACGCTGCGCT CGCCATGGCT
TACGTCAACA ACCCCACGCT GAATTCGGCG CGTGCCGGTA CGCGGGCGGT GGACGAGAAG
GTGCCGCAGG CCCTCTCCGG CTATCGGCCG ACCCTCGGCG CCTCGGCGTC GGCGGGGCCT
GAGGCCTACC GCTACCAGCC CACCGGCACC ACCGCCTCCA GCGGCAATGC CTGGCCACGC
CAGTTCGCCC TGACGGCGGC CTACACCCTG TTCAACGGCT TCATCACCGG CAACCAGACC
CGTACCGCCG AATCGCAGGT GCGGGGCCAG CGGGAGACGC TCCGCAACAC CGAGCAGACG
GTGCTGCTGA ACGGCGTGAC GGCCTATATG AACGTGATCC AGGCCATCGC GCTCCTCGAC
CTCCAGCGGC AGAGCCTCGC CGCGTTCGAG CAGGAATTGC GCGCCACCCG AGACCGCTTC
AACGTGGGCG AGGTGACCCG CACCGACGTG GCCCAGGCGG AGGCGCGTGT CGCCGACGCG
CAGTATCAGG TGAGCCAGGC GGTGGCGAAC CTGTCCTCGG CCCGGGCGGT GTACCGGCAG
GTGATCGGCG TCGAGCCGGG CAAGCTGTTC ACGCCGCGCT CCATCGAGGG CATGCTGCCC
CCCAAGGTGG ATCGCGTGAT TTCGGGCGGG CTGAGCCAGC ATCCCGCCAT CAAGGCATCT
GAATTCGCCG TGGATGCGGC GGTGTTCCAG GTGAAGGTCG CCGAAGGCGC GCTGATGCCG
AACCTGAGCC TGCAGGGCCA GCTTCAGCAG TCCTACGATT CGAGCATCGG CGTGGAGCGG
GTCGGGACCG CTGCGGCGAC CCTTAACCTG TCGGTGCCGA TCTACCAGGG CGGCGTGGAG
TACGCGAACA TCCGCCAGGC GAAGGAGCTA CTGTCGCAGG CGCGGATCGA CGTGGACGTG
AACCGCGACG CCATCCGCGC CCAGGCGGTC CAGTTCTGGG GCGCGCTGGA AGCGGCCAAG
GTGCAGATCC AGGCCGCGCA GGCCTCGGTC GCCGCCAACA CCCTGGCGCT GGAAGGCGTG
CGCGAGGAGT GGCGTGTTGG CCAGCGCACC ACCACCGACG TGCTGAACGC CCAGCGCGAT
CTCACCAACT CCCAGTCCGC CCTCGTGGTG GCGCAGCGTG ACCGCGTGGT GGCGGCCTAT
TCGCTCGTCT CCATCATCGG CCGGCTCGAT GCGGTGTCGC TGGGGCTGAA GGTGGACGTG
TACAATCCCC AGGTGCACTA CAATCAGGTG CGCGACAGCT GGGCCGGCGT CCGCACGCCC
GACGGGAAGT AG
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| Protein sequence | MSVARLVRRN GYAILAGASI IVLGMGSASA QSLDAALAMA YVNNPTLNSA RAGTRAVDEK
VPQALSGYRP TLGASASAGP EAYRYQPTGT TASSGNAWPR QFALTAAYTL FNGFITGNQT
RTAESQVRGQ RETLRNTEQT VLLNGVTAYM NVIQAIALLD LQRQSLAAFE QELRATRDRF
NVGEVTRTDV AQAEARVADA QYQVSQAVAN LSSARAVYRQ VIGVEPGKLF TPRSIEGMLP
PKVDRVISGG LSQHPAIKAS EFAVDAAVFQ VKVAEGALMP NLSLQGQLQQ SYDSSIGVER
VGTAAATLNL SVPIYQGGVE YANIRQAKEL LSQARIDVDV NRDAIRAQAV QFWGALEAAK
VQIQAAQASV AANTLALEGV REEWRVGQRT TTDVLNAQRD LTNSQSALVV AQRDRVVAAY
SLVSIIGRLD AVSLGLKVDV YNPQVHYNQV RDSWAGVRTP DGK
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