| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4215 |
|---|
| Symbol | |
|---|
| ID | 5422705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4667471 |
|---|
| End bp | 4668679 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640883474 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001419093 |
|---|
| Protein GI | 154248135 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0877313 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC TCATCGGCGC AACTTTCGGG GCGACCTTCG CCGCCCTGCT GCTCGCCTCC
GGTGCCGCGA AGGCGCTCGA AGGCGAGATC AAGGTGGGCG AGATCAATTC CTATTCGGCG
CTGCCCGCCT TCACCGAGCC CTATCGCAAG GGCATGGAAC TGGCGCTGAA GGAGATCAAC
GACGCCGGCG GCATCAAGGG CAAGAAGCTG GTCATCATCT CCAAGGATGA CGGCGGCAAG
CCCGCCGACG CCCTCACCGC CGCCAACGAG CTGGTCTCGC GCGACGGCGT GGTGATGATC
TCCGGCGGCT TCCTTTCCAA CGTGGGCCTC GCGCTGGCGG ACTTCGCCAA GCAGAAGCAG
GTGGTCTACA TCGCCGCCGA GCCGCTCACC GACGCCATCG TCTGGTCGAA GGGCAACGAC
TACACCTTCC GCCTGCGCAC CTCCAACTAC ATGCAGGCCG CCATGCTGGC GGAAGAGGCG
GCCAAGCTCC CCGCCAAGAA GTGGGCCACC ATCGCCCCCA ATTATGAATT CGGCCAGTCG
TTCGTGGCCG TGTTCAAGGA GCTGCTGAAG AAGAAGCGCC CGGACGTGGA GTTCGTGGCC
GAGCAGTGGC CGCCGCTCAA CAAGATCGAC GCCGGCCCGG TGCTGCAGGC CATCGACGCC
GCCAAGCCCG ACGCCATCCT CAACGCCACC TTCGCCGGCG ACCTGGTTAA GCTGGTGCGC
GAGGGCAATA CCCGCGGCAT CTTCAAGGAC CGCGCGGTGG TGAGCTATCT CACCGGCGAG
CCGGAATATC TCGACCCGCT GAAGACCGAG ACGCCGGAAG GCTGGATCGT CACCGGCTAT
CCCTGGTACG GCATCAAGAC CGCCGAGCAC CAGGCGTTCC TCGACGCCTA CCAGCAGCTC
CACAAGGACT ATCCGCGCCT CGGCTCCATC GTCGGCTACT CGACGGTGAA GTCCATCGCG
GCGGTGCTGA AGGCCACCGA CGACCACACC ACCGACGGCA TCGTCAAGGC CATGAAGAAC
CTGAAGGTTT CCACCCCCTT CGGCGACATC GTCTATCGCG CCGCCGACCA CCAGTCGACG
CTGGGCGCCT ATATCGGCAC CACCGCGCAG CAGGACGGCA AGGGCGTGAT GGTGAACTTC
ACCTTCAAGC CCGGCGCCGA CTACCTGCCG CCGGAAGCCG AAGCCGCCAA GCTGCGCCCG
GCGAACTGA
|
|---|
| Protein sequence | MKKLIGATFG ATFAALLLAS GAAKALEGEI KVGEINSYSA LPAFTEPYRK GMELALKEIN
DAGGIKGKKL VIISKDDGGK PADALTAANE LVSRDGVVMI SGGFLSNVGL ALADFAKQKQ
VVYIAAEPLT DAIVWSKGND YTFRLRTSNY MQAAMLAEEA AKLPAKKWAT IAPNYEFGQS
FVAVFKELLK KKRPDVEFVA EQWPPLNKID AGPVLQAIDA AKPDAILNAT FAGDLVKLVR
EGNTRGIFKD RAVVSYLTGE PEYLDPLKTE TPEGWIVTGY PWYGIKTAEH QAFLDAYQQL
HKDYPRLGSI VGYSTVKSIA AVLKATDDHT TDGIVKAMKN LKVSTPFGDI VYRAADHQST
LGAYIGTTAQ QDGKGVMVNF TFKPGADYLP PEAEAAKLRP AN
|
|---|
| |