| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4203 |
|---|
| Symbol | |
|---|
| ID | 5421898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4653155 |
|---|
| End bp | 4654033 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640883462 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_001419081 |
|---|
| Protein GI | 154248123 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.434618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG CACCGCCCGC CACCACGCCG CAGCCCATCG TCGAGGTGGG GCAAGATGTG
GACCTCGTGC GCATCGGCAA TGGCCTGCCG CTGGCGCTCA TCGCCGGCCC CTGCCAGATG
GAAAGCCGCG CCCACGCGCT GGAGGTGGCC TCCGCCCTGA AGGAGATCAC CCGGCGGCGC
GGCATCGGCC TCATCTTCAA GACCTCATTC GACAAGGCCA ACCGCACCTC GCTCTCGGCC
CAGCGGGGCC TCGGGCTGGA AGCCGCCCTG CCGGTGTTCG CCGAGATCCG CGAGAGCCTC
GGCCTGCCGG TGCTCACCGA CGTGCACGAG ATCGACCAGT GCGCCGCCGC CGCGCAGGCG
GTGGACGTGC TCCAGATCCC CGCCTTCCTG TGCCGCCAGA CCGATCTGCT CATCGCCGCC
GCCCGCACCG GCAAGACGGT GAACGTGAAG AAGGGCCAGT TCCTCGCCCC CTGGGACATG
GCCAATGTGG TGAACAAGCT CACCGGCGCC GGCAACGGCC GGGTGCTGGT GACCGAGCGG
GGCGTGTCGT TCGGCTACAA CACCCTCGTC TCCGACATGC GGGCGCTGCC CATCCTCGCC
AAGACCACGG GCGCGCCGGT GGTGTTCGAT GCCACCCATT CGGTGCAGCA GCCGGGCGGG
CAGGGCTCCT CCTCCGGCGG CCAGCGCGAG TTCGTGCCGG TGCTGGCCCG CGCGGCGGTG
GCCGTGGGAG TCGCCGCGGT GTTCATCGAG ACCCACCCCG ACCCGGACAA GGCCCCTTCC
GACGGGCCGA ACATGGTGCC GCTCTCCCAG CTGGAAGCGC TGATCACCAC GCTTCAGGCG
TTCGACGCCG TTGCAAAAGC CAATCCCGTC ACCATCTGA
|
|---|
| Protein sequence | MTAAPPATTP QPIVEVGQDV DLVRIGNGLP LALIAGPCQM ESRAHALEVA SALKEITRRR
GIGLIFKTSF DKANRTSLSA QRGLGLEAAL PVFAEIRESL GLPVLTDVHE IDQCAAAAQA
VDVLQIPAFL CRQTDLLIAA ARTGKTVNVK KGQFLAPWDM ANVVNKLTGA GNGRVLVTER
GVSFGYNTLV SDMRALPILA KTTGAPVVFD ATHSVQQPGG QGSSSGGQRE FVPVLARAAV
AVGVAAVFIE THPDPDKAPS DGPNMVPLSQ LEALITTLQA FDAVAKANPV TI
|
|---|
| |