| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4169 |
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| Symbol | |
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| ID | 5421232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4615790 |
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| End bp | 4617202 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640883425 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001419047 |
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| Protein GI | 154248089 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTTTT TCAGCACATT TGGGCGGCGC CCGCGTGGGG CGCTTCTGGC CGCCGGCGCC
CTCGCGCTGC TGCTCGCCGG CTGCCTGCCG CAGGAGCCGG CGCCGGACGT GGGGATCGCC
ACCCCCACCC ATTATGTGGA AGCGCCGGCC AACCCAAACG CCCATCTCCC GCCGCCCGAA
TGGTGGCGGA GCTTTCGCTC CAGCGACCTC ACCCGCTTCG TGGCGGAAGC CAACGTCGAC
AATCTCGACA TCGCCGTCGC CACCGCTGAA ATCGTGCAGG CCGACGCCCA GGTGGGCATA
TCCGGCGCAC CGCTCTACCC CAACCTCACC TTCGCGGGCT CTGCCGCGCA GATCCGCTCC
AGCGGCAGCA GCGGCAATCC GGGTAACACC AGCGGCCAGT ATATTCTCGG CCTGTCCGCC
GGCTACATGG TGGACTTCTG GGGAAAGAAC CGCTCCGGCC TTCTGGCGGC GGAAGAGAAT
GCGGCGGCGG CCCGCTTCAA TCGCGATGTG GTGACGCTGT CCACCCAGGT GGCGGTGGCC
AATACCTATT TCCAGATCCT CGGCGCCCGT GACCAGCTGC GCATCGCGCA GAACAGCCTG
GCCGCCGCAA CCCGCATCCT CGACATCGTG AAGCGACAGT TCGCCGGCGG CACCGTCTCG
CAGCTCGACG TGTCGCAGCA GGAGGCGCTG GTGGCGCAGG TGCGGGCCTC GATCCCGCCC
ATCGAGATCA CCCTGCGCCA GAACTGGGCG GCGCTGGCCG TGCTGCTGGC GCGCACGCCC
GTCGCGCTCA CCCCGCCGCA GGGGAGCCTG TCGCAGATCA CCGTGCCGCG CATCACCCCG
GGATTACCGT CTGACCTCCT CACCCGCCGG CCCGATATTG CCCTCGCCGA GGCCCAGCTC
CAGGCAGGGG GCTATAATGT GGAGGCGGCG CGGGCGGCCA TGCTGCCGCA GATCCAGCTG
ACCGGCACCG GGGGAGTGCA GAGCGCGGCG CTTCAGGCGC TGTTCGCCCC TGGGGCTTGG
TACTACACGC TGGTTGCGGG GCTGACCCAG CCCATTTTCG ATGGCTACCT GCTGCAGAGC
CAGCTCGACC AGGCCAAGGG CGTGCAGGTG CAGGACCTGC AGGTCTATCG CAAGGCCATC
CTGTCGGCCT TCGCCGATGT GGAGAAGGCG CTGGTGGCGC TGGACCAGAC CAACAAGCAG
GTGAAGCTGC AGGCCGACGT GGTGGAAAGC TCACGCACCG CGTTCCGCGT GGCCGAATCC
CAGCTGGCGG GCGGCACCAC CACCCTCGTC GCCGTGCTTC AGGCGCAGCA GACCTACTTT
ACAGCCGAGA ATGGCCTGGC GCAGGCGCGG CTGTCGCGGC TGCTGGCCGC CACCAGCCTG
TTCCAGGCGC TGGGTGGCGG GTGGGGCCCC TGA
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| Protein sequence | MRFFSTFGRR PRGALLAAGA LALLLAGCLP QEPAPDVGIA TPTHYVEAPA NPNAHLPPPE
WWRSFRSSDL TRFVAEANVD NLDIAVATAE IVQADAQVGI SGAPLYPNLT FAGSAAQIRS
SGSSGNPGNT SGQYILGLSA GYMVDFWGKN RSGLLAAEEN AAAARFNRDV VTLSTQVAVA
NTYFQILGAR DQLRIAQNSL AAATRILDIV KRQFAGGTVS QLDVSQQEAL VAQVRASIPP
IEITLRQNWA ALAVLLARTP VALTPPQGSL SQITVPRITP GLPSDLLTRR PDIALAEAQL
QAGGYNVEAA RAAMLPQIQL TGTGGVQSAA LQALFAPGAW YYTLVAGLTQ PIFDGYLLQS
QLDQAKGVQV QDLQVYRKAI LSAFADVEKA LVALDQTNKQ VKLQADVVES SRTAFRVAES
QLAGGTTTLV AVLQAQQTYF TAENGLAQAR LSRLLAATSL FQALGGGWGP
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