Gene Xaut_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4153 
Symbol 
ID5425436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4596568 
End bp4597263 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content65% 
IMG OID640883410 
ProductABC transporter related 
Protein accessionYP_001419032 
Protein GI154248074 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID[TIGR03410] urea ABC transporter, ATP-binding protein UrtE 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.458734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGG TTGAGAACCT CGACCTCTAT TACGGCGCCG CCCACACCCT GAAGAAGGTG 
TCGGTGGAAG CCCATGCGGG CAAGGTCACC TGCGTGCTCG GCCGCAATGG CGTGGGCAAG
ACCTCGCTGT TGCGCGCAAT CGTCGGGCAG CGACCCATCG CCGGCGGCTC CATCATGCTG
GACGGCAAGG AGATTTCGCG GATGCCGACG CCGGATCGCG CCGGGCTCGG CATCGGCTTC
GTGCCGCAGG GTCGGGAGGT GTTCCCACTG CTGTCCGTGA AGGAGAATCT GGAAACCGGA
TTCGCTCGCC TCGCCCGCAA GGACAAATAC GTGCCGGACG AGGTGTTCGA GCTGTTCCCG
GTGCTCAATT CCATGCTGCG CCGGCGCGGC GGCGATCTTT CCGGCGGGCA GCAGCAACAG
CTCGCCATAG GCCGCGCGCT GGTGACGCGC CCGCGCCTGC TGGTGCTGGA CGAGCCGACG
GAAGGCATCC AGCCCTCGAT CATCAAGGAT ATCGGGCGCG CAATTTCCTA CCTGCGTGAC
AAGGGCGACA TGGCCATCGT ACTGGTGGAG CAGTATTTCG AGTTCGCCCG CGACCTTGCC
GACAGCTTCA TCCTGATGGA TCGCGGCGAG GTGGTGGCGA GCGGGGACAG GAGCGGGCTC
GATGGTGACG ACGTCCGCCG CCTCATGGCG ATCTGA
 
Protein sequence
MLKVENLDLY YGAAHTLKKV SVEAHAGKVT CVLGRNGVGK TSLLRAIVGQ RPIAGGSIML 
DGKEISRMPT PDRAGLGIGF VPQGREVFPL LSVKENLETG FARLARKDKY VPDEVFELFP
VLNSMLRRRG GDLSGGQQQQ LAIGRALVTR PRLLVLDEPT EGIQPSIIKD IGRAISYLRD
KGDMAIVLVE QYFEFARDLA DSFILMDRGE VVASGDRSGL DGDDVRRLMA I