| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4144 |
|---|
| Symbol | |
|---|
| ID | 5422966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 4585488 |
|---|
| End bp | 4586666 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640883401 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001419023 |
|---|
| Protein GI | 154248065 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.30134 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC AGGTCGCCCC GTCCACCACC ACGGAAGCCC TCGCCGAGGG CCGGGCCAGC
GTGCTCGCCC GCGGCGCGGT CATTGCCACC GCCATGGTGT TCGGCCTCAC TTATTCGCTG
ACGGCGCCGC TCATCGCCTT CGACCTTGCC GCCCGCGGCC TCAGCGAGGC CGTCATCGGG
GCCAATGCGG CCATGCATGC GGTGGGCGTC CTGGTCACCG CCGTGGTGCT GCCCCGGCTG
GTGGCGATGC TGGGGCCGCG CAAGCTCATC TTCCTCTCCA TCGCCATTTC GGCGGTGGCG
CTCATCGCCT TTCCGCTGCT GCCCATGCTG GCCGCGTGGT TCGTGCTGCG CCTGTTCCTC
GGCATGGCGG CGGAAGCGCT GTTCGTGACC TCCGAGACCT GGATCAACGC CCTCTCCACC
GAGGCCACCC GCGCCCGCTC CATGGCGGCC TATACCGCCG CGCTCTCGGT GGGGCTGGCG
CTGGGGCCCA TCATCCTCTC GCTGGTGGGC ACGGCCGGCG CGCTGCCCTA TGTGACCGGG
GCCGGCATCG CGCTGCTCGC CGCACTGTTC GTCGCCTCGC CACGCGTGGT CGCGCCCCAT
TTCGACGAGC CGACGGTGGG CAATCCCGTG CGCTTCGTGC GCCTCGCCCC CCTCGCCCTG
AGCGCGACCC TGCTCAACGC CGCCATCGAG ACGGCCGGCC TCTCCTTCCT CGCCCTCTAT
GCCGTGAGCC TCGGCTGGGC CGAGGAACAC GCCACCCGCC TGATGTCGGT GATGATGATC
GGGGCCATCG TGCTCCAGCT GCCCATCGGC TGGCTGGGCG ACAAGATGGA CCGGCGCCAC
CTCGTCATAA CGCTGGCCGC GCTTTCGGCT GTGGGCGCGG CGGTGTGGCC GCTCGCCCTT
GGCAGCACGG TCGCCACCTA TGCTTTGCTG TTCGCGTGGG GCGGCGCCTT CGTGGGCATC
TACACTATCA TGATCACGCT GGTGGGCAGC CGCTTCAAGG GCGGCGACCT GGTGGGCATC
TATGCGGTGT CGGGCCTGTT CTGGGGACTG GGCGCGCTGG TGGGGCCGCT GGGTGCCGGC
TTCGCCATGC AGGCCCACCC CCACGGCCTC GCCATCTTTG CAACGCTGGC CTGCGCCGGA
TTTGCCCTTG CCGCGTGGCG GCTGAAGGGA ACGACCTGA
|
|---|
| Protein sequence | MSEQVAPSTT TEALAEGRAS VLARGAVIAT AMVFGLTYSL TAPLIAFDLA ARGLSEAVIG
ANAAMHAVGV LVTAVVLPRL VAMLGPRKLI FLSIAISAVA LIAFPLLPML AAWFVLRLFL
GMAAEALFVT SETWINALST EATRARSMAA YTAALSVGLA LGPIILSLVG TAGALPYVTG
AGIALLAALF VASPRVVAPH FDEPTVGNPV RFVRLAPLAL SATLLNAAIE TAGLSFLALY
AVSLGWAEEH ATRLMSVMMI GAIVLQLPIG WLGDKMDRRH LVITLAALSA VGAAVWPLAL
GSTVATYALL FAWGGAFVGI YTIMITLVGS RFKGGDLVGI YAVSGLFWGL GALVGPLGAG
FAMQAHPHGL AIFATLACAG FALAAWRLKG TT
|
|---|
| |