| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4133 |
|---|
| Symbol | |
|---|
| ID | 5425093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 4573915 |
|---|
| End bp | 4574847 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640883389 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_001419012 |
|---|
| Protein GI | 154248054 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.812681 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.156164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGAGC TGGAAGAGCC GGCAACCGCC GCCTTCCCGC CGCGCTCGCG CGACCTATCC
TTCCTGCGGG CGGTGATCGA TCGCCGGCTC GGCCTGCTGG TGCCGCCCGC CGCGTCCCAC
CCGGCCGTGC TGCATGCCGC CATGCGGCAC ATCCTGCTCT CGCCCGGCAA ACGGCTGCGA
CCCCTTCTCA CCCTTGCCGC CGCGATCCAG CTCAACGCCT CCGAGCATGC GGTGCTGGAT
TTTGGCTGCG CGCTGGAGAT GATCCACGCC TCCTCGCTGA TCGTGGACGA CCTCCCGTGC
ATGGACGACG CCGCCATGCG CCGCGCCCAG CCCACCACCC ATGTGCAGTA CGGCGAGGAT
GTCGCGGTGC TGGCCTCCAT TGGCCTTTTG TCGCGCGCCT TCGGGGTGGC GGCGGCAGCG
CCGGGGGTGA GCGAGCGTGC GCGCCTAGAA GCGGTCGCCA TCCTCTCCAT GGCGGTGGGC
TCGCTGGGCC TGTGCGGCGG CCAGTATGAT GACCTGCGCC CGAGCCCCGG CCGCAGCCTG
TCCGCTACCG AGGACGTGAA CCGCCGCAAG ACCGGCGTGC TGTTCTCGGC CGCTGTGGAG
ATCGCCGGCC ATGTGGCGGC CGCCGACGAG ACCCAGATGG GCCACCTGAA GGCCCTGGCC
GGCCATGTCG GCCGCGCATA TCAGATCCTC GACGACATTC TGGATGCCTC CGCCTCTTCC
GCCAGCCTCG GCAAGGACGT GGGCAAGGAT GCCCACAAGG CCACCGTCAT CGCCTCCCTC
GGCGCGCCGC GCGCGCGCAA GCTCCTGTCC GAGCACCTGG CGGGCGCCCT TGCCACCTCT
CAGGAGCTGG GACCCAACAC GGAAGGCCAG GAGCCCCTGC GCGATTTCAT GACCGCCGCC
TTCGGCGAAC TGATGGGGCC GCTGGCGCCG TGA
|
|---|
| Protein sequence | MQELEEPATA AFPPRSRDLS FLRAVIDRRL GLLVPPAASH PAVLHAAMRH ILLSPGKRLR
PLLTLAAAIQ LNASEHAVLD FGCALEMIHA SSLIVDDLPC MDDAAMRRAQ PTTHVQYGED
VAVLASIGLL SRAFGVAAAA PGVSERARLE AVAILSMAVG SLGLCGGQYD DLRPSPGRSL
SATEDVNRRK TGVLFSAAVE IAGHVAAADE TQMGHLKALA GHVGRAYQIL DDILDASASS
ASLGKDVGKD AHKATVIASL GAPRARKLLS EHLAGALATS QELGPNTEGQ EPLRDFMTAA
FGELMGPLAP
|
|---|
| |