| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4095 |
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| Symbol | rpsD |
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| ID | 5421396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4533099 |
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| End bp | 4533716 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640883351 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001418974 |
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| Protein GI | 154248016 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.366206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC GCATTGCGGC CAAGCACAAG ATCGATCGCC GTATGGGCGA GAACATCTGG
GGCCGCTCCA AGAGCCCGGT GAATCGTCGT GAGTACGGTC CCGGCCAGCA CGGCCAGCGC
CGTAAGGGCA AGCTGTCCGA CTTCGGCGTG CAGCTGCGCG CCAAGCAGAA GCTGAAGGGC
TATTACGGCT CCATCGGCGA AAAGCAGTTC CACAAGGTGT ATGTCGAGGC CTCGCGCCTC
AAGGGCGACA CCGGCGCCAA CCTGATCGGC CTGCTGGAGC GCCGTCTCGA CGCGGTGGTG
TACCGCGCCA AGTTCGTGCC CACCATCTTC GCCGCCCGCC AGTTCGTCTC CCACGGTCAC
GTGAAGGTGA ACGGCCAGCG CGTGAACATC CCGTCCTACC TGGTGAAGGT CGGTGACGTG
GTTGAGGTGA AGGAAGCCTC CCGCCAGATG ACCCTGGTGC TGGAAGCCCA GCAGCTCGGC
GAGCGCGACG TGCCCGACTA CATCGAGCTC GACGCCGGCA AGCTGGCGGC TCGCTTCGCC
CGCATTCCGG AGCTGAACGA GGTGCCCTAC CCGGTCCAGA TGGAACCGAA CCTCGTGGTC
GAGTTCTATT CGCGCTGA
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| Protein sequence | MSKRIAAKHK IDRRMGENIW GRSKSPVNRR EYGPGQHGQR RKGKLSDFGV QLRAKQKLKG
YYGSIGEKQF HKVYVEASRL KGDTGANLIG LLERRLDAVV YRAKFVPTIF AARQFVSHGH
VKVNGQRVNI PSYLVKVGDV VEVKEASRQM TLVLEAQQLG ERDVPDYIEL DAGKLAARFA
RIPELNEVPY PVQMEPNLVV EFYSR
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