| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4085 |
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| Symbol | |
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| ID | 5420901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4523496 |
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| End bp | 4525697 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640883341 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001418964 |
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| Protein GI | 154248006 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.24261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAGG GCGGTATCAT TCCCCGTCGC CAGGGTAGCC CCGCTTATCG TTCCCTCCTG
GCGGGACTGA TGGCGCTCGC GCTTTTGGTC GCGGGTCTGG TCACGGTCTT CGTGCTGGCG
GGGCTGCGCC AGGACGACAA GGCGCGCACC CGCGAGCGGG CCGCTCTTCT CTCCTCCCTG
CGCGCCCGCG AAACGGTGAT GGAGCAGGCG CTTGTCGCTA CCAATGACGA GCGGCAAGCC
CTGCGCCAAC TGGTGCTGGG GGACATGACT CCCCTGCATC GGCACTTCGG CCAGAAGCTC
AATGACGGAT TCGGCTTCGA GTTCGTCTAC ATCACCGACG CCAGGGGCCG TGTCGTCTAT
TCCTCCGAGC GGGGCGAGCA GAATGAGCTG CGGGCCTACA GCTGGATCCG CCCCGCCATC
GAGCGGGCGC TGGCCGATGG GCAGAAGGCA GCGCTCTCGG GCGTGGTGGC CACGGACGAC
GCGGCCGGAT TGATGGTGGC CCGCCCCTTC GACGAAAAGG TCGAGGGGCT CGACCTGGCC
CAGCCGCTGG TGGCCATCAC GGTCGATATC ATCGACCCTG AGTTCCTGCG GATGGTGGGC
GCTCCCGCGA GCCTTGAGGA GGTGGAGCTG ATCCACCGGC CGCTCCATGG CGGCCGGGAA
GCGGGTGTCT TCATCCCCAA CCTCTATGAC GGCTCGGAGG CGGAGCTGGT GTGGCGGGGC
GCGCATCCCG GCAGCAAGAT GCTGTGGACG CTGATGCCGG CCGCCGCTGT GCTCGCCAGC
CTTCTCGCCG TGCTGTTCCT GGTGCTCATG ATCCGGGCCC GCCGGATGGC GGCCGACCTT
GTCGCCAGCG AGGCCAAGGC GCGGGAGCTG GCCGCGCGCG ACTACCTGAC CGGCCTGCTG
AACCGGGGCG CCTTCATCGA GGCGCTGGAC GCCGCCATCG CCCGGCGCCG GAATGGGGAG
ACGCTGGCAC TGCTGTTCGT CGACCTCGAC GACTTCAAGG TCATCAATGA CAGCGCCGGC
CATGCCGCCG GCGACGACCT CCTGCGCGCC TTCGCCCGGC GGACCGAGGA GGCGCTGGGG
GAGGGGAGCG TTGTTGCGCG CTTTGGCGGC GACGAGTTCG TGGCCATGGT CCCCTGCCGG
AACGACGCGG ATCTTGATCA CGCCGTGGAG CGGCTGTTCA GGGAACTGGC GCCGCCGGTC
CTGCTGGAGC AGGGCGGCGA CCTGAGCCTG AGCGCCTGCG TGGGCGCGGC GCGCCTGCCC
CGGGACGCCG CCACCGGCGC GGAGCTGATG CGGCTCGCCG ATGTCGCCCT CTACCGGGCC
AAGGCCGACG GCACCGGCCT CTACCGTCGG TTCGAGCCGG GGTTCGACGC GGAGCGGATC
GAGCATCGGC GTATCGAGAC GGAACTGGCG GCGGCGCTGG ACAAGCGCGA AATCACGTTG
GTCTACCAGC CCCAGGTGGA TGTGGAGAGC GAGCGCGTCG TCGGCTTCGA GGCGCTGGCC
CGCTGGGACC ATCCCACCCA GGGGCGGCTC CTGCCGGGCG CCTTTCTGGC TGTGGCCGAG
ACCTCACGCC TCATGGGGCG GTTCGATGCC TATGTGTTGC GCATGGCCCT GATGGAAGCG
CGGGCCCTGC CTGAGGTGAC GCTGTCGGTG AACATGTCGG CGCTGAACCT GCGGCAGGGG
GCCATCTTCG GCATGGTGGT CACGGCACTG GCCGAAACCG GGTTCAATCC GGCACGGCTG
GAGATCGAGA TCACCGAAAG CGCGATCCTC GACGCCGCGA GCGACGGCCA GGAGGCACTG
CAGAAACTGC GGGACATGGG GGTACGGATC GCCCTCGATG ATTTCGGCAC CGGCCATGCC
TCGCTGGTTC ACCTGCGGCG CTTCCCCATC ACCAAGATCA AGATCGACAA GTCCTTCATC
CTCGACATGG CCACCGACCG GGATGCGTCG GCCATCGTGG AATATGTGAT CCGGCTCGGC
CGCTCCCTCG GCATCACCCT GACCGCGGAA GGGGTGGAGA CGCGCGAGCA GTTGCGCTTC
CTCAGGGCCT TCGGCGCCCA GCAGGCGCAG GGCTATCTGT TCGCGCCGCC GCTGCCGCTT
GCGGCCGCCA TTGCCATGCT GGAGCGGCAG TCCGTGGCGC AGTCCGGTGT CGCGGCTGCC
GGTGTGGCAG CTACCGGCGC CGCCGTGTCG GGCCCGAGCT GA
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| Protein sequence | MKEGGIIPRR QGSPAYRSLL AGLMALALLV AGLVTVFVLA GLRQDDKART RERAALLSSL
RARETVMEQA LVATNDERQA LRQLVLGDMT PLHRHFGQKL NDGFGFEFVY ITDARGRVVY
SSERGEQNEL RAYSWIRPAI ERALADGQKA ALSGVVATDD AAGLMVARPF DEKVEGLDLA
QPLVAITVDI IDPEFLRMVG APASLEEVEL IHRPLHGGRE AGVFIPNLYD GSEAELVWRG
AHPGSKMLWT LMPAAAVLAS LLAVLFLVLM IRARRMAADL VASEAKAREL AARDYLTGLL
NRGAFIEALD AAIARRRNGE TLALLFVDLD DFKVINDSAG HAAGDDLLRA FARRTEEALG
EGSVVARFGG DEFVAMVPCR NDADLDHAVE RLFRELAPPV LLEQGGDLSL SACVGAARLP
RDAATGAELM RLADVALYRA KADGTGLYRR FEPGFDAERI EHRRIETELA AALDKREITL
VYQPQVDVES ERVVGFEALA RWDHPTQGRL LPGAFLAVAE TSRLMGRFDA YVLRMALMEA
RALPEVTLSV NMSALNLRQG AIFGMVVTAL AETGFNPARL EIEITESAIL DAASDGQEAL
QKLRDMGVRI ALDDFGTGHA SLVHLRRFPI TKIKIDKSFI LDMATDRDAS AIVEYVIRLG
RSLGITLTAE GVETREQLRF LRAFGAQQAQ GYLFAPPLPL AAAIAMLERQ SVAQSGVAAA
GVAATGAAVS GPS
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