Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4049 |
Symbol | |
ID | 5424455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 4479387 |
End bp | 4481279 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640883303 |
Product | histidine kinase |
Protein accession | YP_001418928 |
Protein GI | 154247970 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.431231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.418791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCCCG ATCTCGCCAC CGCAGCGCGC GCCATGCTCC TCGCCGTTCT CGGCGCGGCA GCACTGTTCG CCGTGGTGAA GGCGGGGGAG ATGGCGGAGG CCCGCGTCGG CGAGCGCCTC GCCAGCGAGG CCCGCCACCG CAGCGAGATC TATGCCCAGA GCCTGGAGGG CGCCATCGAG CGGTTCGGCT ATCTGCCCGC CGCCGCCGCC CTCGACCTCA ATGTGCGCAG CGCCCTCGTC CAGCCCGACG ACCCGAGGCT GATCGCCACC GTCAACACCT ATCTGGAAAC CCTCAACCGC GCTGCCGGGG CCAGCGTGCT CTATCTCATC GACCCCTCGG GCATGACCAT CGCCGCGTCC AACTGGGACA CGCGGGAGAC CTATGTGGGC GTGGACTTCA GCTATCGCCC CTATTTCACC GAGGCCATGG CGGGCCAGGC CGGCCGGTTC TACGCCATCG GCACGCTGAC CGGCGTGCCC GGCTATTTCA TCAGCGCCCC GGTGGCGATC GACGGCAGGA TCCGGGGCGT GGTGGTCACC AAGGTCAATC TCGACCCCTT GGAGGCGGTG TGGCAGGAGG CCGCCGACCG GGTGCTGGTG ACCGACCCGA ATGGCATCGT CTTCCTCGCC TCCGATACGC GCTTCAAGTT CCACGCTACC CGCCCCATCG ATGCCGCCAC CGCGCAGGAA TTGAAAAAGA CTCGCCAATA CGGGCGCAAG ACCTATCCGC TGCTCAATCT CGGCACGGTG GAGACGGTGG GCGGCGTGCC TCTGATCGCG GCCTCGGACG TGGCCCCTCA CGGCCGTGTC ATCGCCGACG ACAAGCCCCT TGTCCCCTAT GACTGGCACC TGCTGCTGTT TGCAGACGCC GCCGCGCTGG AGCTGGCCGG GCGCACCGCC CGCGTGGGCA TGACGCTGGG CTTCGGCGTG CTCGGCCTCA TCGGCCTCTA TTGGTGGCAG CACCTCAAGC GCGCCCGCGA GAGCCTCGCC GCCCGCGCGG CACTGGAGGC GGCGCAGCGC GAGCTGGAAG CCAAGGTGGA AGCCCGCACC GCCGACCTCA CCGCCGCCAA CGGCCAGCTC GCGGGCGAGA TCGAGGAACG CCGCCGCGCC GAGGCGGAGC TGCGCGCCGC GCAGGACGAG CTGGTGCAGG CCGCCAAGAT GGCGACCCTC GGCCAGATGG CGGCCGGCAT CACCCATGAG CTGAACCAGC CCCTCACCGC CTTGCGCGGC CTCGCCGACA ATGCCGGCAA GCTTTTGGAG CAGGGGCGCG AGGAGGAGGC GCAGGCCAAT CTCGGCCGCA TCACCGCCAT GGTGGACCGG CTCGGCAAGA TCACCGGGCA GTTGCGCGCC TTCGCCCGCA AGAGCAGCAG CGAGACGCTG CCGGTGGACG TGGCGGCGGC GGTGGCCGAG AGCCTCGCCA TCCTCGCCCC GCGCATCCGC GTCGCCGGCA TCGGCGTCCA GACCGACCTC GACGCGGCCG CTGCCACCGT GCGGTTCGAA CCCATCCGCC TCAGCCAGGT TCTGGTGAAC CTCGTGGGCA ACGCGCTGGA CGCGGTGAAG GGTCGGCCTA GCGCCTGGGT CGGCCTTTCC ACCCGGCGCG AGGGCTCCCG CATCGTCCTC AGCGTGGAGG ACAACGGCCC CGGCCTGCCG GAGGCCACCC TCGCGCGCAT CTTCGATCCC TTCTTCACCA CCAAGCCGGC GGGCGAGGGG CTGGGGCTGG GCCTGCCCAT CTCGCTCGCC ATCGCCCGCG AATTCGGCGC CACCCTCACC GCCCGCGCGC GAACAGGCGG CGGCCTCGCC TTCGATCTCG TCATGGAGGC TGCGGAGAGC GCGGACGCCG CCCCGCCCCA GCCGGAAAGA TTGCGCCACG AAAGGACGCA CCATGTGTGC TGA
|
Protein sequence | MRPDLATAAR AMLLAVLGAA ALFAVVKAGE MAEARVGERL ASEARHRSEI YAQSLEGAIE RFGYLPAAAA LDLNVRSALV QPDDPRLIAT VNTYLETLNR AAGASVLYLI DPSGMTIAAS NWDTRETYVG VDFSYRPYFT EAMAGQAGRF YAIGTLTGVP GYFISAPVAI DGRIRGVVVT KVNLDPLEAV WQEAADRVLV TDPNGIVFLA SDTRFKFHAT RPIDAATAQE LKKTRQYGRK TYPLLNLGTV ETVGGVPLIA ASDVAPHGRV IADDKPLVPY DWHLLLFADA AALELAGRTA RVGMTLGFGV LGLIGLYWWQ HLKRARESLA ARAALEAAQR ELEAKVEART ADLTAANGQL AGEIEERRRA EAELRAAQDE LVQAAKMATL GQMAAGITHE LNQPLTALRG LADNAGKLLE QGREEEAQAN LGRITAMVDR LGKITGQLRA FARKSSSETL PVDVAAAVAE SLAILAPRIR VAGIGVQTDL DAAAATVRFE PIRLSQVLVN LVGNALDAVK GRPSAWVGLS TRREGSRIVL SVEDNGPGLP EATLARIFDP FFTTKPAGEG LGLGLPISLA IAREFGATLT ARARTGGGLA FDLVMEAAES ADAAPPQPER LRHERTHHVC
|
| |