| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4035 |
|---|
| Symbol | |
|---|
| ID | 5424400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 4463703 |
|---|
| End bp | 4464593 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640883289 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001418914 |
|---|
| Protein GI | 154247956 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.876944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0228737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAG GAACCGGTCA ATCAGCGCGT GGGAGTGCCC CCTTGCGCGG CCTGTGGGCG
CCCCTTGCGG CGCTGGCGAT CTTCGCGGCC TGTGCGGCCC CCGCCGGTGC CCAGACCCTC
GACCGGGTGG CGGGCGGAGA AGCCTTTCGC ATCGGCTATC GCCAGTTCGC CCCGCCCTAT
TCCTACGCCG CCGCCAACGG CCAGCCCTCG GGCTATATCG TGGACCTGTG CCGCGAGGTG
GCGGACGGGG TGAAGCGGAC GCTGAAGCTG CCGGCCATCA AGGTGGATTA TGTGAAGGTC
ACCGCCGAGG ACCGCTTCGA GGCGGTGCGC GACGGGCGCA TCGACATCCT GTGCGAGCCG
TCCTCCATGA CCATGTCGCG GCGAGCGCTG GTGGACTTCT CCCTGCCGAC CTTCCTTGAC
GGGGCGGGCG TCGTCACCCG TGGCGCGCCG GTGAAGGGGC TGGAGGACCT CAAGGGCAAG
AAGGTGGGCG TGCTGCGCGG CACCACCACC GAGGAGACCC TGCGCTCCAC CCTGGGCCAG
ATGCGCATCG CCGCCGACAT CGTCACCGTC ACCGACCATC CCGACGGGCT CAAGCAGCTC
GCCGATGGCA AGCTCGACGC CTATTTCGGC GATCGCGGCA TCCTCAACTA CCTGATCGCC
AACAGCCCGG CCGGCAACCG CCTCAGCCTC TCCGACCAGT ATTTCACCTT CGAGACCTAT
GCCCTCGCCC TGCCCCGCGG CGATCAAGCG TTCCGTCTGG TGGTGGACGC GACGCTCGCG
GACCTCTACC GCACCGAGCG CATCCGCGAC ATCTATGCCA AGAGCTTCGG CAAGTTCCCG
CCGGACCAGT TCCTCAACGC CCTCTTCGTC ATCAACGGCG TGCCGAAATA G
|
|---|
| Protein sequence | MATGTGQSAR GSAPLRGLWA PLAALAIFAA CAAPAGAQTL DRVAGGEAFR IGYRQFAPPY
SYAAANGQPS GYIVDLCREV ADGVKRTLKL PAIKVDYVKV TAEDRFEAVR DGRIDILCEP
SSMTMSRRAL VDFSLPTFLD GAGVVTRGAP VKGLEDLKGK KVGVLRGTTT EETLRSTLGQ
MRIAADIVTV TDHPDGLKQL ADGKLDAYFG DRGILNYLIA NSPAGNRLSL SDQYFTFETY
ALALPRGDQA FRLVVDATLA DLYRTERIRD IYAKSFGKFP PDQFLNALFV INGVPK
|
|---|
| |