| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4011 |
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| Symbol | |
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| ID | 5423766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4441320 |
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| End bp | 4441865 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640883265 |
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| Product | peptidase S26C conjugative transfer signal peptidase TraF |
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| Protein accession | YP_001418890 |
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| Protein GI | 154247932 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.118395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCGCT TCGGCTATGT CATGGTGACG TATTTCTCGG TGATGGGGGT GGCGGCTGTC
GCGTTCGTTC CGACATCGCT CAAGCTGGTG TGGAACGTCT CCGCCAGCGC GCCCGTCGGG
CTCTATGCCA TCGAGCCGGC GCGCTGGCTT GAGGTCACGG AGCTCCTCGC CATCACGCCA
CCGGCAGCGC TCGCCCGCTT CCTGGTGGAG CGCGGTTATG TGGGCCCCGG TGTGCCGCTG
ATGAAGCGCG TGGCGGCGCT TCCCGGACAG GAGGTCTGCC GCAAGGGCCG CGCCATCATG
GTGGACGGCG TGGTCTATGG CGATGCGCTC GATCGCGACC GCATGGGCCG TCCCCTGCCG
GTCTGGCGCG GATGCCGTCG CATCGCCCAA GGCGAGCTCT TCCTCATGAA TTTCGACGTG
CCGGACAGCC TCGACGGGCG GTATTTCGGC CCACTGCCCG CCAGCACCGT AATCGGCCGC
GCCGTGCCGA TCTACACCGA CGAGGCCGGC GACGGGCACT TCGTCTGGCG TGCGCCGACG
CGCTGA
|
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| Protein sequence | MTRFGYVMVT YFSVMGVAAV AFVPTSLKLV WNVSASAPVG LYAIEPARWL EVTELLAITP
PAALARFLVE RGYVGPGVPL MKRVAALPGQ EVCRKGRAIM VDGVVYGDAL DRDRMGRPLP
VWRGCRRIAQ GELFLMNFDV PDSLDGRYFG PLPASTVIGR AVPIYTDEAG DGHFVWRAPT
R
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