Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4005 |
Symbol | |
ID | 5424053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 4433438 |
End bp | 4434292 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640883259 |
Product | integrase catalytic region |
Protein accession | YP_001418884 |
Protein GI | 154247926 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.5936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCTC AAAAAATGGT GACGCCCGAT GCGAGGCGCA AAGCCGTGGC TCATGCCTGT GCGGCGCACG GGGTGAGCCA GCGTCGGGCG TGCCAGGCGC TGGGCGTCGA TCGCACCAGC GTGCGCTACC GAAGTGTGCG TCCCGACGAT GCACCCCTGA GGGAGGCCAT GCGGGCCGTG GCCGGCGAAC GCCGCCGCTT CGGCTATAGG CGCATCCACA TCATGCTGAG GCGCCAGGGC ATCGTCATGA ACCAGAAGAA GCTGCGCCGG CTGTATCGGG AAGAGAAGCT TCAGGTTCGC CGGCGTGGGG GACGCAAGCG AGCGCTCGGC ACGAGGCGTC CCATCCTGGT GCCGGATCGG GTCAACGTCC GCTGGAGCCT CGATTTCGTG TCGGATGCCT TCACGGACGG TCGGCGCTTC CGGGTGCTGG CCGTCGTCGA CGACTTCAGC CGGGAGTGTC TGGCGCTGGT GGCCGACACC TCGCTCTCGG GCCTTCGGGT GACGCGCGAG CTCGACGCGC TGCTCGCCAT TCGAGGCAGG CCTGCAACCA TCGTTTCCGA CAACGGCACG GAGCTGACTT CGATGGCAAT TCTCAAATGG TGCCAGCAGA CCGGCGTCGA ATGGCACTAC ATCGCTCCCG GCAAGCCCAT GCAGAACGGC TTCGTCGAGA GCTTCAACGG CCGCTTCCGG GACGAATGCC TGAACGAGAC CCTGTTCTCG AGCCTGGCGC AGGCCCGTGC CGCCATCGCC GCATGGAAGG AGGACTACAA TATGAACAGG CCCCATTCCG CCCTCGGCCA TCGATCCCCT GCCGAGTTCG CCGCAACAAT CGCACTGGAA ATCCAGGCCG CCTGA
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Protein sequence | MSAQKMVTPD ARRKAVAHAC AAHGVSQRRA CQALGVDRTS VRYRSVRPDD APLREAMRAV AGERRRFGYR RIHIMLRRQG IVMNQKKLRR LYREEKLQVR RRGGRKRALG TRRPILVPDR VNVRWSLDFV SDAFTDGRRF RVLAVVDDFS RECLALVADT SLSGLRVTRE LDALLAIRGR PATIVSDNGT ELTSMAILKW CQQTGVEWHY IAPGKPMQNG FVESFNGRFR DECLNETLFS SLAQARAAIA AWKEDYNMNR PHSALGHRSP AEFAATIALE IQAA
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