Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4000 |
Symbol | |
ID | 5423868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 4428196 |
End bp | 4429182 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640883255 |
Product | P-type conjugative transfer ATPase TrbB |
Protein accession | YP_001418880 |
Protein GI | 154247922 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACTT CACCTCACAG TTCGGAAGGC CTGACACGCG GCGAACGCAT GTTGCGCACC GCGCTTGGCC CGATGATCAC CCGCCTTCTT GAAGACCCGG CCGTCGTCGA GGTCATGCTC AATCCGGACG GGCGCCTGTG GGTCGACCGG CTGTCCGAGG GGCTTCGCGA TACAGGCGAG CGATTAGCCG CCGCCGATGG CGAACGCATC GTCCGCCTCG TTGCGCACCA TATCGGCGCC GAGGTCCATG CCGGCGCCCC GCGGGTGTCA GCCGAACTGC CGGGAACGGG AGAGCGGTTC GAAGGCCTGC TCCCGCCCGT CGTGGCCTCC CCGACCTTCG CCATCCGCAA ACCGGCCGCC GCCGTCTTCA CGCTCGACGA CTATGTCGCC GCCGGCATCA TGTCTGCGCC GCAGGCCGAA GCCCTGCGCC ATGGCGTCGC CTCCCGCGCC AACATCCTGG TCGCCGGCGG CACCTCCACC GGCAAGACCA CGCTCACCAA CGCGCTGCTC GCCGAGGTGA CCAAGACCTC CGAACGCGTC GTCCTCATCG AGGACACACG AGAACTCCAA TGCGCAGCCC CCAACCTTGT AGCGATGCGC ACCAAGGACG GCGTCGCCTC GCTCTCGGAC CTCGTCCGCT CATCGCTGCG CCTGCGGCCG GATCGCATCC CCATCGGCGA GGTCCGAGGT GCCGAAGCCC TTGACCTCCT GAAGGCCTGG GGCACAGGCC ACCCTGGGGG CATCGGCACC ATCCACGCCG GCAGCGCCAT CGGGGCCTTG AGGCGTCTCG AGCAACTCAT CCAGGAAGCC GTCGTCACCG TACCTCGGGC CCTGATCGCC GAGACCATCG ACCTCATCGC CGTGCTGTCG GGCCGCGGCT CCGCGCGCCG CCTTTCCGAG CTCTCTCACG TCGAAGGTCT CGGGCCCGAC GGCGACTACC GCGTCATCCC CATCACCGCT CCATCCGAAG AAGGAACCTC CCTGTGA
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Protein sequence | MATSPHSSEG LTRGERMLRT ALGPMITRLL EDPAVVEVML NPDGRLWVDR LSEGLRDTGE RLAAADGERI VRLVAHHIGA EVHAGAPRVS AELPGTGERF EGLLPPVVAS PTFAIRKPAA AVFTLDDYVA AGIMSAPQAE ALRHGVASRA NILVAGGTST GKTTLTNALL AEVTKTSERV VLIEDTRELQ CAAPNLVAMR TKDGVASLSD LVRSSLRLRP DRIPIGEVRG AEALDLLKAW GTGHPGGIGT IHAGSAIGAL RRLEQLIQEA VVTVPRALIA ETIDLIAVLS GRGSARRLSE LSHVEGLGPD GDYRVIPITA PSEEGTSL
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