| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3996 |
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| Symbol | |
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| ID | 5421241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4424415 |
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| End bp | 4425149 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640883251 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_001418876 |
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| Protein GI | 154247918 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.158502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCC TGATGCTGCG GGCGGCGCTC GTCGCTGCGC CGCTCCTCAT GTGCCCTCTC
GCGCCGGCCG CGGCACAGGC CGTGGTCTTT GACCCCTCCA ACTATGCCCA GAACGTCCTC
CAGGCGGCGC GGGCCTTGCA GCAGGTCACC AACCAGATCA CCTCGCTTCA GAATGAAGCA
CAGATGCTGA TCAACCAGGC CCGCAACCTC GCAAGCCTGC CGTATTCCTC CCTCAGCGCG
CTCCAGCAAT CCGCCCAGCA GACCCAGCAG TTGCTCGGGC AGGCGCAGAA GATCGCTTAT
GACGTCGGCG CCATCGACCG GGCGTTCCAA GGTCAGTACG GCTCGGTTTC CCTGAGCACC
TCGGACGCTG CTCTTGTCAC CCAGGCTAAG ACCCGCTGGG AGACCACGGT CGCCGGTCTT
CAGGATGCGC TGCGGGTGCA GGCGGGCGTC GTCGGCAATC TCGACATTGG CCGGACCCAG
GCCTCAACAC TGGTCGGCCA GAGCCAGGCG GCGACCGGCG CGTTGCAGGC CATCCAGGCA
GGGAACCAGC TCCAGGCGCT CCAGGCGCAG CAGCTCTCCG ATCTCACCGC GGTGGTGGTC
GCCAATGGCC GGGCGCAGGC GCTGTCCGAA GCTGAGCGTG CCACGGCGGT GTCTGAGGGG
CAGGAGCACT ACCGGCGCTT CTCCACCCGG TCGAGCTACC AGTCCTCCGC CGTCACCATG
TTCCGCGGCA ATTGA
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| Protein sequence | MIRLMLRAAL VAAPLLMCPL APAAAQAVVF DPSNYAQNVL QAARALQQVT NQITSLQNEA
QMLINQARNL ASLPYSSLSA LQQSAQQTQQ LLGQAQKIAY DVGAIDRAFQ GQYGSVSLST
SDAALVTQAK TRWETTVAGL QDALRVQAGV VGNLDIGRTQ ASTLVGQSQA ATGALQAIQA
GNQLQALQAQ QLSDLTAVVV ANGRAQALSE AERATAVSEG QEHYRRFSTR SSYQSSAVTM
FRGN
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