Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3992 |
Symbol | |
ID | 5423886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 4421121 |
End bp | 4422173 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640883247 |
Product | P-type conjugative transfer protein TrbG |
Protein accession | YP_001418872 |
Protein GI | 154247914 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0363697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.115635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCTG CCATCCGCAC ATCCGGGAGG CCGGCTTTCC GCGTCCTCTC CTTTCCGTCT TTCCGGAAGT CCGGCTTGCC ACTTCTCCTG CTTTGCACAT CGGCCCTGGC GGGCTGCGCC ACCTTCGAGA AGCCCCCGGA GATCGAATAT GACGATGCCC CGCCCGCCGT CTTCAAGGCT GAGCCGCCGG GGCCGGTGCG CATCGTTGAG CTGCCGAAGC CCTTGCCGCT GCCCGGCCAG CTGAAGCCGG TGGGCAAGGA CGGCAAGGCC GAGCCCGAGT CCGCGGACCC GACGGCCCGA GTGAACCAGG CCAATGCTGC CGCGCGCGTT CAGCCGGTGC GCAACGGCTT CATCAACTCC ATGCAGGTCT ATCCCTTCGT GGATGGCGCG CTCTATCAGG TCTACGCTTC GCCCGGTCAG ATCACCGACG TCGCCCTGCA ACCCGGCGAG CAACTGGTGG GCACGGGGCC GGTCGCTGCC GGCGACACGG TGCGCTGGAT CATCGGCGAC ACCGAGAGCG GGGCGGGCGG GGCAAAGCAA GTCCACATCC TGGTGAAACC GACACGGCCG GACCTCACCA CCAACCTCGT CATCAACACC AATTTGCGCA CCTACCACAT GGAGCTGCGC TCCACCGAGA AGACCTACAT GGCCTCGGTC TCCTGGCAAT ATCCCCAAGA CCAGCTCATC GCCCTCAGGC GCCAGAACGC GGAAGCGCAG GCGGTGCAGC CCGTCGCCAC GGGCATCGAC CTGGCAAAGG TGAACTTCCG CTACGAGGTG AGCGGCGACC GGGCACCGTG GCGGCCGCTG CGCGCCTTCG ATGATGGGCA GCAGGTCTTC ATCGAGTTTC CCCGCGGGAT CGCCCATGGC GAGATGCCGC CGCTGTTCGT GGTCGGGCCG CAAGGCGACA CCTCCGAACT CGTGAACTAT CGCGTGCGCG GCACCTATAT GATCGTGGAC CGGCTCTTCG CAGCCGCCGA GCTGCGCTTC GGCGCCGACA AGGACCAGAA GCGCGTGCGC ATCTCCCGCA CCGACGGGAG GCCGGTCCTA TGA
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Protein sequence | MMPAIRTSGR PAFRVLSFPS FRKSGLPLLL LCTSALAGCA TFEKPPEIEY DDAPPAVFKA EPPGPVRIVE LPKPLPLPGQ LKPVGKDGKA EPESADPTAR VNQANAAARV QPVRNGFINS MQVYPFVDGA LYQVYASPGQ ITDVALQPGE QLVGTGPVAA GDTVRWIIGD TESGAGGAKQ VHILVKPTRP DLTTNLVINT NLRTYHMELR STEKTYMASV SWQYPQDQLI ALRRQNAEAQ AVQPVATGID LAKVNFRYEV SGDRAPWRPL RAFDDGQQVF IEFPRGIAHG EMPPLFVVGP QGDTSELVNY RVRGTYMIVD RLFAAAELRF GADKDQKRVR ISRTDGRPVL
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