| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3984 |
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| Symbol | |
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| ID | 5423742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4409627 |
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| End bp | 4412836 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640883240 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001418865 |
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| Protein GI | 154247907 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.544325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.398907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACG CCATCCTCGC CTTCTCCATC CGCCAGCGCT GGCTGGTGGT GATGGCCTGC
CTCGCCGTTG GTGCCGTCGG GGCGTGGAAC TTCACCCGCC TGCCCATCGA CGCGGTGCCC
GACATCACCA ACGTGCAGGT GCAGATCAAC ACCTCCGCGC CCGGCTTCTC GCCGCTGGAG
ACCGAGCAGC GCATCACCTT TCCCATCGAG ACCGCCATGG GCGGCCTGCC GGGCCTGCAC
TACACCCGCT CGCTGTCCCG CTACGGCCTC AGCCAGGTGA CGGTCGTGTT CCAGGACGGA
ACCGACATCT ACTTCGCCCG CCAGCTGGTG AACGAGCGCA TCCAGCAGGC GAGGGACCAG
CTTCCGCCGG GGGTGGAGAC CGCCATGGGG CCGGTCTCCA CGGGCCTCGG CGAAATCTAC
ATGTACACGG TGGAGGCCAA GGACGGGGCG AGGAAGCCCG ATGGGCAGCC CTTCAGTCCC
ACCGACCTGC GCACCGTCCA GGACTGGATC ATCAAGCCGC AGCTGCGCAC CGTGCCGGGC
GTGGTGGAGG TGAACACCAT CGGCGGCTTC GAGCGGCAGT TCCACGTGCT GCCCGATCCG
GCGCGTCTCA TGGCCTACCG CATGTCGTTC CGCGACGTGA TGACGGCGCT GGCCGCCAAC
AACGCCAACG TGGGCGCCGG CTATATCGAG CGCAACGGCG AGCAGTATCT GGTGCGCACG
CCGGGCCAGG TGGCGGACGC CGCCGAGATC CGCGAGATCG TCATCGGCAG CCGGGGCGGC
ACGCCGCTGC GCATCGGCGA TATCGCCGAG GTGCGCGAAG GCCGCGAGCT GCGCACCGGC
GCGGCGACCC TGAACGGGGA AGAGGTGGTG CTGGGCACCA CCATGCTCCT CATAGGCGAG
AACAGCCGCA CCGTGGCCCA GCGCGTCGCC GCGCGGTTGC AGGAGATCTC CCGCTCCCTG
CCCGAGGGGG TCATCGCCCG CGCGGTCTAC GACCGCTCGC ACCTCGTGGA AGCCACCATC
GCGACGGTGG AGAAGAACCT GCTGGAAGGC GCCTTGCTGG TGGTGGTGGT GCTGTTCGTG
CTGCTCGGCA ATTTCCGGGC GGCGCTGGTG ACCGCCTGCG TCATCCCGCT CTCCATGCTC
TTCACCATCA CCGGCATGGT GGAGAACCGC GTCAGCGCCA ACCTGATGAG CCTCGGCGCC
ATCGACTTCG GCATCATCAT CGACGGGGCG GTCATCATCG TCGAGAACTG CCTGCGCCTG
CTGGCGGAAG AGCAGCATCG GCGCGGCCGG CTCCTGACCC GCGCCGAGCG GTTCGAGACC
ATCCTCGCCG GCTCCAGGGA GGTGATCCGG CCGAGCCTGT TCGGCACCAT GATCATTGCC
GTGGTCTACC TGCCGGTGCT CACCCTAACG GGGGTGGAGG GCAAGATGTT CACGCCCATG
GCCATCACCG TCCTGATGGC GCTGGCCGGC GCGGCTCTGT TCTCCATGAC CTTCATTCCG
GCGGCCATCG CGCTGCTCGT AACGGGTAAG GTCTCCGAGC ACGAGAACGT CATCATGCGC
GGGGCGCGGC GCTTCTATAC GCCGTTGCTC GATGCCGCCA TCAACTACCG CGCCGTGGTG
GCGGTGGCCG CGGCTGGCCT CGTGGTTGCG AGTGGCCTTG CCGCCTCCCG CATGGGCGGC
GAGTTCATTC CGAGCCTCGA CGAGGGCGAT GCGGCGATCC AGGCGCTCAG GGTGCCGGGC
ACCAGCCTTA CCCAGTCGCT GGAGATGCAG CAGGCGCTGG AGAAGAGCCT GCTGAAGGTG
CCGGAAGTGA AGGAGGTGTT CGCCCGCACC GGTACGGCGG AAGTTGCCAC CGACCCAATG
CCGCCCTCCA TCTCCGACGG TTACGTGATG CTGAAGCCAC GCGCCGAATG GCCGGATCCC
GGCAAGCCCA AGAGCGCGGT GATGACCGAC ATCGAGAAGG CGGCGGAGGG CGTGGCGGGG
AGCAATTACG AACTCTCCCA GCCGATCCAG CTGCGCTTCA ACGAGCTGAT CTCCGGCATC
CGCAGCGACG TGGGCGTCAA GATCTTCGGC GACGACCTCG ACATGCTGCT GCAGGTGGCC
GGGCAGGTGC AGAGCGTGCT CCAGGCGGTG CCGGGCGCCG CCGACGTGAA GACCGAGCAG
GTCTCCGGCC TGCCCATGCT GACGGTCGCC CTCAATAGAG CGGCCATGGC CCGTTACGGG
GTAAGCGTCG CCGACGTGCA GGAGCTGGTA GAGATCGCGG TGGGCGGCCG CGAGGCCGGC
GCCCTGTTCG AGGGCGATCG CCGCTTCGAC ATCGTGGTGC GCCTGCCGGA GGAATTGCGC
ACCGACATCG AGGCCCTGCG CGCGCTGCCG GTGCCGCTTC CCCCTGCGGC GAGCGATGAG
GCCAAGCCAG TCCAGGCCGC CTGGATCCCG GGATCTGGCG GGCAGATCCG CTACGTGCCG
CTGTCCGCCA TCGCCAACCT CACGGTCTCC CCCGGCCCGA ACCAGATCAG CCGGGAGAAC
GGCAAAAGGC GCATCGTGGT GAGCGCCAAC GTGCGCGACC GCGACCTCGG CTCCTTCGTC
ACCGACGCCC AGCGCCAGGT GGCGGATAAG GTGAAGCTGC CCGAAGGCTA CTGGATCGGC
TGGGGCGGCC AGTTCGAACA GCTGGTTTCG GCCACACAGC GCCTTGCCAT CGTGGTGCCC
ATCGCGCTGT TGCTCATCTT CCTGCTGCTG TTCATGAGCT TCGGCTCGGT AGCGGATGCG
CTGCTGGTGT TCTCCGGCGT GCCGCTGGCG CTCACGGGGG GCATCGCGGC GCTAATCTTG
CGCGACCTGC CGCTCTCCAT CAGCGCCGGC ATCGGCTTCA TCGCGCTCTC GGGCGTGGCG
GTGCTGAACG GCCTCGTCAT TATCGCCTTC ATCCAGCGCC TGCGGGCGGA AGGGCGGGAC
GTGGTGACGG CGGTGCGCGA CGGCGCCCTG ACACGCCTGC GCCCGGTGCT GATGACGGCG
CTGGTCGCTT CGCTCGGCTT CGTGCCAATG GCCATCGCCA CCGGCCCGGG CGCGGAGGTG
CAGCGCCCGC TCGCCACCGT GGTCATCGGC GGCATCATCT CCTCCACCAT CCTCACCTTG
CTCGTGCTGC CAGCACTCTA CGTGCTGTTC CGGCGCGAGA CCAGGCCAGC GGCCTCCCCG
GAGGCGCTGG CCGAAGCCCC ATCCCCCTAG
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| Protein sequence | MIDAILAFSI RQRWLVVMAC LAVGAVGAWN FTRLPIDAVP DITNVQVQIN TSAPGFSPLE
TEQRITFPIE TAMGGLPGLH YTRSLSRYGL SQVTVVFQDG TDIYFARQLV NERIQQARDQ
LPPGVETAMG PVSTGLGEIY MYTVEAKDGA RKPDGQPFSP TDLRTVQDWI IKPQLRTVPG
VVEVNTIGGF ERQFHVLPDP ARLMAYRMSF RDVMTALAAN NANVGAGYIE RNGEQYLVRT
PGQVADAAEI REIVIGSRGG TPLRIGDIAE VREGRELRTG AATLNGEEVV LGTTMLLIGE
NSRTVAQRVA ARLQEISRSL PEGVIARAVY DRSHLVEATI ATVEKNLLEG ALLVVVVLFV
LLGNFRAALV TACVIPLSML FTITGMVENR VSANLMSLGA IDFGIIIDGA VIIVENCLRL
LAEEQHRRGR LLTRAERFET ILAGSREVIR PSLFGTMIIA VVYLPVLTLT GVEGKMFTPM
AITVLMALAG AALFSMTFIP AAIALLVTGK VSEHENVIMR GARRFYTPLL DAAINYRAVV
AVAAAGLVVA SGLAASRMGG EFIPSLDEGD AAIQALRVPG TSLTQSLEMQ QALEKSLLKV
PEVKEVFART GTAEVATDPM PPSISDGYVM LKPRAEWPDP GKPKSAVMTD IEKAAEGVAG
SNYELSQPIQ LRFNELISGI RSDVGVKIFG DDLDMLLQVA GQVQSVLQAV PGAADVKTEQ
VSGLPMLTVA LNRAAMARYG VSVADVQELV EIAVGGREAG ALFEGDRRFD IVVRLPEELR
TDIEALRALP VPLPPAASDE AKPVQAAWIP GSGGQIRYVP LSAIANLTVS PGPNQISREN
GKRRIVVSAN VRDRDLGSFV TDAQRQVADK VKLPEGYWIG WGGQFEQLVS ATQRLAIVVP
IALLLIFLLL FMSFGSVADA LLVFSGVPLA LTGGIAALIL RDLPLSISAG IGFIALSGVA
VLNGLVIIAF IQRLRAEGRD VVTAVRDGAL TRLRPVLMTA LVASLGFVPM AIATGPGAEV
QRPLATVVIG GIISSTILTL LVLPALYVLF RRETRPAASP EALAEAPSP
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