| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3982 |
|---|
| Symbol | |
|---|
| ID | 5423592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4408259 |
|---|
| End bp | 4409248 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640883238 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001418863 |
|---|
| Protein GI | 154247905 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.500568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.355177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCA CGGCGCGACG CGACGTGGCG ATGCTCCTCG TCGGCCTCCT GGCCGGCGCG
GGGGCGCTTT ACACGTTCCA GGACCGCAAC GCCCCCGTTT CGGGCAGCCT CGCCGCCGAG
CGCGGGCATG GCGCCGAGGG CGGGCATGGA GAAGAAGGGG GCGGGCACGC CGAGGGCGGG
GTGGAGCTGG ACGACACCAG GCTCGCCGCC GCCGGCATTG GCCTGGAGAC GGCCGGCCCC
GGGACGCTGC GCCAGAAGCT GCGCCTCAAC GGCCTGGTCC AGCCCAACCA GGAAAACGTG
GTCCAGGTGA CCCCGCGCTT TCCCGGCATC GTCCGGGAGA TCCGCAAGCG CATCGGCGAC
ACGGTGGCCA AGGGCGACGT GCTCGCGGTG GTCGAGAGCA ACCAGAGCCT CACCACCTAC
GACATGAAGG CGCCCATCTC CGGCACCGTG GTGGATCGGC AGGTGGGCCT CGGCGAATAC
GCCTCCGAGC AGAAGCCGGC GTTCGTGGTG GCCGACCTGT CGACCCTTTG GGTGGACCTC
TCGGTCTATC GCCGCGATTT CCCGCGGGTG CGGGCCGGCG ACACGGTCGC CATCGATCCG
GAGGACGGCG GGCCTGTCAT CGACGGCCGG GTGGCCTATG TCTCGCCCAT CGGCTCGGCC
GACACCCAGA CCGCGCTGGC GCGGGCGGTC ATTGCCAACG ACGGCATGCG GCTGCGGCCC
GGCCTGTTCG CGGTGGGCAC CATCACCCTT GCGGAGAAGC CGGTGGACCT CGCGGTCCGC
GCCAGCGCGC TCCAGACCAT CGACAACCGC ACGGTGGTGT TCGTGCGCGA CGGCGACGCC
TTCGCCCCGC GCGACGTGGA GATCGGCGCG CGCGACGGCG AATGGGTCGA GGTGCTATTC
GGCCTGATGC CCGGCGATGT CTACGCCGCG AAGAACAGCT TCGTGGTGAA GGCGGAACTC
GCCAAGGGGA GCGCCAGCCA TGAGCACTGA
|
|---|
| Protein sequence | MSRTARRDVA MLLVGLLAGA GALYTFQDRN APVSGSLAAE RGHGAEGGHG EEGGGHAEGG
VELDDTRLAA AGIGLETAGP GTLRQKLRLN GLVQPNQENV VQVTPRFPGI VREIRKRIGD
TVAKGDVLAV VESNQSLTTY DMKAPISGTV VDRQVGLGEY ASEQKPAFVV ADLSTLWVDL
SVYRRDFPRV RAGDTVAIDP EDGGPVIDGR VAYVSPIGSA DTQTALARAV IANDGMRLRP
GLFAVGTITL AEKPVDLAVR ASALQTIDNR TVVFVRDGDA FAPRDVEIGA RDGEWVEVLF
GLMPGDVYAA KNSFVVKAEL AKGSASHEH
|
|---|
| |