| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3973 |
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| Symbol | |
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| ID | 5423408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4399163 |
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| End bp | 4400584 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640883229 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001418854 |
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| Protein GI | 154247896 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.181102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGGA TCGGCCTTGT GGGCCTCGCT CTCGCCGCCA TTCTGGCGGC GGGGATCGGA
GGCTATTGGG CGGGCGTCCG GGATTTCCCA GTAGCCGGCC TGCGCGAATG GTTCGGTGTC
GAGGCGACCC TTGCGGCGGC TGAGCCGGTC GGGACGGGAG CGGTGATCTA TTATCAGGAT
CCCGACGGCA AGCCGGTCTA TTCGGCAACG CCGCGCCGGA CCAGGGATGG CCGGGCTTTC
CGCACCGTTC GCGCCAGCGA GGATGTGAGC TTCGAAGGCA GGCCGCCGGC GACAGTTGAG
GCGGCTGGGC AGGCCGGCCC GCGGCGCATC CTCTACTACC GCAACCCGAT GGGTCTGCCG
GACACCTCGC CGATGCCGAA GAAGGACTCG ATGGGGATGG ACTACATCCC CGTCCATGAG
GGCGAGGACG ACAACGGCTC GGTCGTGAAG GTCTCGCTTG GCAAGCTGCA GCGGACCGGT
GTGCGATCCG AGTTGGCCGC GCGGCGTGTC GTCGGCAGGC TGGTGCGGGT GCCGGGAACC
GTCCAGCTCG ACGAGCGGCG CATCTCCGTG GTCGCCACCC GGAGCGACGC CTTCATCAAC
GAGGTGGCGA ACGTCACCAC GGGCGACCGG GTGACGAAGG GCCAGATGCT GCTCCGGCTT
TATGCGCCGG ATATCGCCAC CGCCGGCGCC CAGCTCCTAA CCGATCTCAA AAGCGGCGGC
CGCGATAGTG CTCTCGGAGG CGCCCGCCAG CGCCTAGAGA ATCTCGGCCT GCCGCCTGAA
GCGATCGCCG AGATCGAGCG CACGCGCAAG GTGCCGCTGT CGATGACGTG GCGTGCGCCG
CGCGATGGCG TCGTACTCGA ACGCAATGTC GTCGACGGCA TGAAGGCAGC ACCGGGCGAT
GTGCTGTTCC GCCTCGCCGA CATTTCGACC ATCTGGGTAC TGGCGGATGT GCCGGAGTTC
GATCTTGGGG CCGTCCGGCT CGGCGCGCCG GTGACGATCC GGGCTCGAAG CCTGCCGGGA
CGCACCTTCG AAGGACGTGT GTCGCTGATC TATCCGCAGG TCGGTGAAGC AACGCGGGCC
ACGCGAGTGC GGATCGAGAT CGCCAATCCC GGCGGTGTTC TGCTTCCCAA TATGTATGCC
GAAGTGGAGA TCGGCACAGG CGATGCCGCG CCGGTGGTTG CTGTCCCCGA TAGCGCGGTG
ATCGACACCG GCACGCGGCA GGTCGTGATC ATTGATCGTG GAGAGGGCCG GTTCGAACCG
CGCGAGGTAA AGATCGGCCT GCGCGGCGAA GGCTTCACCG AGATCCGCGA GGGCATCGCG
GAAGGCGACC GTGTCGTTGT CGCGGCGAAC TTCCTGATCG ACGCCGAGAG CAATCTGAAG
GCGGCGCTGC GTGGCCTGAC ACCTGCGGAG GCACAGCCAT GA
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| Protein sequence | MKRIGLVGLA LAAILAAGIG GYWAGVRDFP VAGLREWFGV EATLAAAEPV GTGAVIYYQD
PDGKPVYSAT PRRTRDGRAF RTVRASEDVS FEGRPPATVE AAGQAGPRRI LYYRNPMGLP
DTSPMPKKDS MGMDYIPVHE GEDDNGSVVK VSLGKLQRTG VRSELAARRV VGRLVRVPGT
VQLDERRISV VATRSDAFIN EVANVTTGDR VTKGQMLLRL YAPDIATAGA QLLTDLKSGG
RDSALGGARQ RLENLGLPPE AIAEIERTRK VPLSMTWRAP RDGVVLERNV VDGMKAAPGD
VLFRLADIST IWVLADVPEF DLGAVRLGAP VTIRARSLPG RTFEGRVSLI YPQVGEATRA
TRVRIEIANP GGVLLPNMYA EVEIGTGDAA PVVAVPDSAV IDTGTRQVVI IDRGEGRFEP
REVKIGLRGE GFTEIREGIA EGDRVVVAAN FLIDAESNLK AALRGLTPAE AQP
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