| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3972 |
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| Symbol | |
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| ID | 5423407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4395993 |
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| End bp | 4399166 |
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| Gene Length | 3174 bp |
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| Protein Length | 1057 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640883228 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001418853 |
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| Protein GI | 154247895 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.287099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCC ACCTCATCGG CTGGTCCGCC CGCAACCTCG TGCTGGTCTT CATTGGCACA
GTGTTCGCCG TCGCTGCCGG GCTCTATGCG CTGAAAACGC TGCCGCTCGA CGCCATCCCC
GACCTCTCGG ACGTGCAGGT GATCGTCTAT ACCGACTATC CCGGCCAGGC GCCGCAGGTG
GTCGAGGACC AGGTCACCTA TCCGCTCACC ACCTCGATGC TGACGGTACC AAAATCGAAG
GTGGTGCGCG GCTTCTCCTT CTTCGGCGTC TCTTTCGTCT ATGTGATCTT CGAGGACGGC
ACCGACCCCT ATTGGGCACG CAGTCGCGTG CTGGAATATC TCAACGCCGC CGCGCAGCGG
TTGCCGGCGG GCGTGACGCC GACCTTAGGA CCGGACGCGA CCGGTGTCGG CTGGGTCTAC
CAATATGCCG TCGTCGCCAA GGAGATGACG CTCGCCGAGC TGCGCTCGCT GCAGGACTGG
GTGATCCGCT TCGGCGCGTC CAAAGCGGAG GGTGTCGCCG AGGTCGCCAG CGTCGGCGGC
TTCGTGAAGC AGTATGCGAT CGTGGTCGAT CCGAACCGGC TGCGGGCGTT GGGCATCTCG
CTCGATCGGG TGCGCGACGC CGTCAAGGCC AGCAATGCTG ATGTCGGCGG GCGCACCGTC
GAGCTCTCCG AGTTCGAGTT CATGGTGCGC GGGCGCGGCT ATATCCGGAG CGTCGCCGAC
ATCGAGAACG TGGTGCTGAA GACCGACCGC GGCGTGTCGC TGCGGGTCAA GGATGTGGCC
CGCGTCGAGA TCGGCCCGGA CGAGCGGCGT GGCATCACCG AGCTCAATGG CGAAGGCGAG
GTCGCCAGCG GCATCGTGCT GCAACGCTTC GGCGCCAATG CGCTGACAGT GATCGAGAAC
GTCAAGGCGC GGCTCGCCGA GATTGCGACG AGCCTGCCCA AGGGCGCCGA GATCGTGCCG
GTCTATGACC GATCCGAGCT GATCGGCCGG GCGATCGAGA CGCTGAAGGG CACGCTGATC
GAGGAAAGCA TCATCGTCGC GCTGGTCTGC GTGGTGTTCC TGCTGCATCT GCGCAGCGCG
CTCGTCGCCA TCCTGATGCT GCCGGTCGGC ATCCTGATCG CCTTCGCGGC GATGAAGGCG
ATCGGGCTTG GCTCCAACAT CATGAGCCTC GGGGGCATCG CCATCGCGGT GGGCGCCATG
ATCGACGCGG CCATCGTCAT GATCGAGAAC GCCCACAAGC ATCTGGAGCG GGCTCCTCCG
GACAAGCCGC GCGTCGAGAT CCTGATCGAG GCGGCGAGCC AGGTCGGGCC GGCGCTGTTC
TTCAGCCTGC TCGTCATCAC CGTCTCCTTC CTGCCGATCT TCACGCTGGA ATCGCAGGAA
GGCCGGATGT TCGGCCCGCT CGCCTTCACC AAGACCTTCT CGATGGCAGC TGCAGCGTTG
CTGTCGGTGA CGTTGGTGCC AGCGCTGATG GTGGTCTTCG TGCGCGGCCG GATCATCCCG
GAGCACAGGA ACCCGATCAA TCGCTTCCTG ATCTGGGTCT ATCGCCCCGT CATTAGCGGC
GTCCTGAAGG CCAAGACGCT CACCATCCTC GTCGCGCTCG TCGTGCTCGG CGTGACCCTC
TGGCCGGCAC GCCAGCTCGG CTCGGAATTC ATGCCGAGCC TCGACGAGGG CACGCTGATG
TACATGCCGA CCACCTTGCC GGGCATCTCG GTCACCAAGG CGGCCGAACT GCTTCAGGTG
CAGGACCGCA TCATCAAGAG CTTCCCGGAG GTAGCCTCGG TCTATGGCAA GGCGGGGCGC
GCGCTCACAG CGACCGATCC GGCGCCGACC GAGATGTTCG AGACCATCAT CAACCTGAGG
CCGAAGGACG AATGGCGCCC CGGCCTCACC ATTGACAGTC TGAAGGCCGA GATGGACCAG
GCGCTACAAT TCCCCGGCGT CTCCAATGCC TGGACCATGC CGATCCGCGC CCGCATCGAC
ATGCTCGCGA CCGGCATCCG CACCCCGGTC GGGGTCAAGG TGTTCGGCAC CGATCTCGCC
CAGATGGAGC AGAGCGCCCG TGAGATCGAG CGGGTGCTGC GATCGGTGCC GGGCACATCG
AGCGCCTATG CCGAGCGCGT TATCGGCGGC TACTATCTCG ACATCGTGCC GGACCGGGAG
GTGCTCGGCC GCTACGGCCT GGCCATTGGC GATGTCCAAA GCGTGATCGC AAGCGCGCTC
GGGGCGGAGA CGGTGACCAC CACAGTCGAG GGCCGCGAGC GCTACGCCGT CACCATCCGC
TATCCCCGCG ACTTCCGGAG TGACCCGCAG TCAATCGCCC GCGACGTGCA GGTGCCGTTG
CCAGGCGGCG GAACGGTGCC GCTCGGCGAA GTCGCCAAGG TCGAGCTCAC CCGCGGCGCA
ACTTCGATCC GCACCGAGAA CGGCCAGCTC GCCGTCTATG TCTTCGTGGA TATCGCTGGC
CGGGACCTGG GCGGCTATGT CGCCGAGGCG CAGCAGGCGG TCGCGAACGA GATCAAGCTG
CCGCCCGGAA CCTATGTCTC GTGGAGCGGC CAATTCGAAT ATCTCCAGCG CGCCGCGGCG
CGGCTGAAGA TCGTCGTGCC GGTGACGCTG CTGGTCATTT TCCTGCTGCT CTACCTCAAC
TTCCGGGCAC TCACCGAGAC GCTTATCGTC ATGCTGTCGC TGCCCTTCGC GCTGGTCGGT
GGCATCTGGC TGATGTGGTG GCTCGGCTTC AACATGTCGG TCGCCGTTGC CGTCGGCTTC
ATTGCCCTCG CAGGTGTGGC CGCCGAGACC GGCGTCATCA TGCTGATCTA TCTCGAGCAG
GCGATGGCGG AACTGAAGGC TGAGCGGGAG GCGCAAGGAC GGCCCTTCAC CCGCATCGAC
CTCTATCAGG CGATCATGCT CGGCGCCGTA GAACGGGTGC GGCCGAAGAT GATGACGGTC
ATCGCGATCA CGGCCGGGCT CGTCCCCATC CTGTGGAGCA CCGGCACCGG CTCGGAGGTG
ATGCAACGCA TCGCGGTGCC GATGATCGGC GGCATGGTGT CCTCGACGGT GCTGACGCTC
GCCGTGATCC CAGCGGTCTA CGGTTTGATC AAGGGTTGGC GATTGCCGCG GAGCGTCGCC
TCCGAGAGGG CGATCGAACA GGGGCCGGCC GGCCTCAAGG CGGCCGCCAA ATAA
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| Protein sequence | MIAHLIGWSA RNLVLVFIGT VFAVAAGLYA LKTLPLDAIP DLSDVQVIVY TDYPGQAPQV
VEDQVTYPLT TSMLTVPKSK VVRGFSFFGV SFVYVIFEDG TDPYWARSRV LEYLNAAAQR
LPAGVTPTLG PDATGVGWVY QYAVVAKEMT LAELRSLQDW VIRFGASKAE GVAEVASVGG
FVKQYAIVVD PNRLRALGIS LDRVRDAVKA SNADVGGRTV ELSEFEFMVR GRGYIRSVAD
IENVVLKTDR GVSLRVKDVA RVEIGPDERR GITELNGEGE VASGIVLQRF GANALTVIEN
VKARLAEIAT SLPKGAEIVP VYDRSELIGR AIETLKGTLI EESIIVALVC VVFLLHLRSA
LVAILMLPVG ILIAFAAMKA IGLGSNIMSL GGIAIAVGAM IDAAIVMIEN AHKHLERAPP
DKPRVEILIE AASQVGPALF FSLLVITVSF LPIFTLESQE GRMFGPLAFT KTFSMAAAAL
LSVTLVPALM VVFVRGRIIP EHRNPINRFL IWVYRPVISG VLKAKTLTIL VALVVLGVTL
WPARQLGSEF MPSLDEGTLM YMPTTLPGIS VTKAAELLQV QDRIIKSFPE VASVYGKAGR
ALTATDPAPT EMFETIINLR PKDEWRPGLT IDSLKAEMDQ ALQFPGVSNA WTMPIRARID
MLATGIRTPV GVKVFGTDLA QMEQSAREIE RVLRSVPGTS SAYAERVIGG YYLDIVPDRE
VLGRYGLAIG DVQSVIASAL GAETVTTTVE GRERYAVTIR YPRDFRSDPQ SIARDVQVPL
PGGGTVPLGE VAKVELTRGA TSIRTENGQL AVYVFVDIAG RDLGGYVAEA QQAVANEIKL
PPGTYVSWSG QFEYLQRAAA RLKIVVPVTL LVIFLLLYLN FRALTETLIV MLSLPFALVG
GIWLMWWLGF NMSVAVAVGF IALAGVAAET GVIMLIYLEQ AMAELKAERE AQGRPFTRID
LYQAIMLGAV ERVRPKMMTV IAITAGLVPI LWSTGTGSEV MQRIAVPMIG GMVSSTVLTL
AVIPAVYGLI KGWRLPRSVA SERAIEQGPA GLKAAAK
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