Gene Xaut_3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3962 
Symbol 
ID5423125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4385548 
End bp4386516 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content60% 
IMG OID640883218 
Productphosphonate ABC transporter, periplasmic phosphonate-binding protein 
Protein accessionYP_001418843 
Protein GI154247885 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.55964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTAC CGCGCTTTCT CGCACGCACC CTCATGCTTG CCGCCATGTG TCTGGGGCCA 
AGCATCGCCC ATGCTGACTT CAAGCTCGAT CCACGCTTCA CGGACGCGAA TGGCGACATG
GTCGCGGACG CGCCCACTGA TCCTTCCAAG CAGATCGACC CGGACACGCT GATCTTCTCC
TACACCCCCG TTGAGGATCC GGCCGTCTAC GCCAAGGTGT GGCAGGAATT CACCGACCAT
CTTGCGAAGG TGACCGGCAA GAAGGTGCAG TTCTTCCCCG TGCAGTCCAA CGCCGCCCAG
CTCGAAGCCA TGCGTGCCGG GCGCCTGCAT GTGGCCGGCT TCAACACCGG CTCCAATCCC
ATCGCCGTCG CCTGCTCCGG CTTTGTGCCT TTCGCCATGA TGGCCTCGAA GGATGGCGCC
TACGGCTATG AGATGGAGAT CATCACCTAT CCCGGCTCCG GCATCACTAA GGTTGAAGAC
ATCAAGGGTA AGAAGATGGC CTTCACCTCG GAGACCTCCA ATTCCGGCTA CAAGGCGCCG
TCCGCGCTGC TGCGCTCGCA GTTCGGCATG GAGGCGGGCA AGGATTACGA ACCCGCCTTC
TCCGGCAAGC ACGACAATTC CATCATCGGC GTCGCCAACA AGGATTATCC GGCAGCGGCC
GTCGCCAATT CGGTGATGAA GCGCATGATC GCCCGCGGCG TGATCAAACC CGAGCAGGTG
GTTACCATCT ACAAGTCGCA GACCTTCCCC ACCACCGGCT ATGGCTATGC CTACAATCTG
AAGCCCGAGC TTGCCGCCAA GGTGAAAGAG GCGTTCTTCA GCTTCAATTG GGATGGCACT
GCTCTCCTGA AGGAGTTCCA GTCGGCCGAG CCGCCGCAGG AGAAATTCAT TTCCATCACC
TTCAAGGAGA CCTGGGCGGT GGTGCGCCAG GTCGATGACG CCATGGGCGT CAGCTACGCC
TGCAAGTAA
 
Protein sequence
MTLPRFLART LMLAAMCLGP SIAHADFKLD PRFTDANGDM VADAPTDPSK QIDPDTLIFS 
YTPVEDPAVY AKVWQEFTDH LAKVTGKKVQ FFPVQSNAAQ LEAMRAGRLH VAGFNTGSNP
IAVACSGFVP FAMMASKDGA YGYEMEIITY PGSGITKVED IKGKKMAFTS ETSNSGYKAP
SALLRSQFGM EAGKDYEPAF SGKHDNSIIG VANKDYPAAA VANSVMKRMI ARGVIKPEQV
VTIYKSQTFP TTGYGYAYNL KPELAAKVKE AFFSFNWDGT ALLKEFQSAE PPQEKFISIT
FKETWAVVRQ VDDAMGVSYA CK