| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3948 |
|---|
| Symbol | |
|---|
| ID | 5421139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4369025 |
|---|
| End bp | 4370347 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640883204 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001418829 |
|---|
| Protein GI | 154247871 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCATG AGCCTCCCGT CATCGGCCTC GTGGAGGACG ATCCCATCAT GGGCGAGAGC
CTCGCGCAGC GGCTCGGCCT GGAGGGAATG AGGGTGCATT GGTGGCGGAC CGGCTGCGCA
GCGGTGGCGG ATATCCGGAA GATTCGCTTC GAGGCTATCG TATGCGACAT CCGCCTTCCG
GATCTCGATG GGGAGGCTGT GTTCCGGGAA GCGGCGCACG TGCCTCGGAC GCCGCCTTTC
CTGTTCGTGA CCGGCCATGG CGACATCGAC CAAGCGGTGC GCCTGATGCG GTCCGGCGCG
GCGGACTACG TCACCAAGCC CTTCGAGATG GAGGACTTCC TGGCGCGGCT CACCGACTTG
CTGATGCCGC ATGGAACCAC GGAAGGCGGC ACGTTGGGCG TCTCACCCGC CATCCGGCAG
GTGGAGGCTC TGTTGTGCAG GATGGCTCGC CTGTCCTCCA ATCTGCTCAT CACGGGGGAG
ACAGGGACAG GTAAGGATGT AGCCGCCCGC TTCATCCATG CGCAATCGCG GCACGCGACC
GCGCCGTTTA TCGCGGTCAA CTGCGCCGCC ATTCCCGCCG ACTTGATGGA AAGCGAGCTG
TTCGGCCACG AGCGAGGCGC GTTCACCGGT GCCGCGCAGC GCCATCTCGG CTATGTGGAG
CGCGCCGGCG ACGGCACGCT GTTTCTCGAC GAGATCGGGG AATTGCGTCC GGAGTTGCAG
GCAAAACTCC TGCGGCTGAT CGAGAGCAAG ACGTTTCAGA GGGTCGGCGG TGAGCGCGAG
ATCGCCTTCG GCGGCCGTAT CGTGACGGCC ACCAACGCCG ATCTGGCGCT GCGAGTTGTC
GAGCGACAAT TCCGCGAGGA TCTCCTTTAC CGCATCAACG CGGTCAGCAT TCGCCTGCCA
TCTCTGCGGG AGCGCCCCGA TGACATCCCA TGGCTCATGG AGCGCTTCTT TACGGAATAT
AGCGCGGACA CCGAGACCAA CCTGAAAGGG ATCAGCGCCC TCGCCGAGGA GGCCGCGATG
CAGCATCCTT GGCCCGGGAA TGTGCGGGAG CTGCGGAACC GGATGGAGCG TGCGGTCGCT
CTTGCCTTGG GCCCCTGGCT GATGCCCGGG GATCTCTTTC CCGAGATCGT TCGCGAAGGC
GCTGACGCCG GCCTACGGAT CGGCTCACTG GAATCCGCGC GCCAGGAGGC GGAGAAGCGT
CACATCCTCC GGGCGCTGTT CGCGACCGCG GGCGAACTCT CCGCCGCCGC CCGGCTCCTC
GGCGTTGGGC GCACCACCCT GTGGGAGAAG ATGCGCCGCC TCGGTTTGGG TAGCGACGGC
TGA
|
|---|
| Protein sequence | MSHEPPVIGL VEDDPIMGES LAQRLGLEGM RVHWWRTGCA AVADIRKIRF EAIVCDIRLP
DLDGEAVFRE AAHVPRTPPF LFVTGHGDID QAVRLMRSGA ADYVTKPFEM EDFLARLTDL
LMPHGTTEGG TLGVSPAIRQ VEALLCRMAR LSSNLLITGE TGTGKDVAAR FIHAQSRHAT
APFIAVNCAA IPADLMESEL FGHERGAFTG AAQRHLGYVE RAGDGTLFLD EIGELRPELQ
AKLLRLIESK TFQRVGGERE IAFGGRIVTA TNADLALRVV ERQFREDLLY RINAVSIRLP
SLRERPDDIP WLMERFFTEY SADTETNLKG ISALAEEAAM QHPWPGNVRE LRNRMERAVA
LALGPWLMPG DLFPEIVREG ADAGLRIGSL ESARQEAEKR HILRALFATA GELSAAARLL
GVGRTTLWEK MRRLGLGSDG
|
|---|
| |