Gene Xaut_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3936 
Symbol 
ID5423381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4357261 
End bp4358586 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content66% 
IMG OID640883192 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001418817 
Protein GI154247859 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATG CCGACGCCAT CGTCATCGAG GACGATGAGG ACGTGAAGCT CGGCTGCCTG 
CAGGCGCTGG CGCTGGAGGG CATCAAGGCC ATCGGCTACG ACAGCGTCGA GGCGGTGCCC
AGGCCCCTGT CGCGGGATTT TCGCGGCGTC ATCATCTCCG ACATCCGGCT GCCGGGCATG
GACGGCATGA GCTTCCTCGC CAAGCTCACC AACCACGATC CCGACCTGCC GGTCATCATG
ATCACCGGCC ACGGCGACGT GGCGACCGCC GTGCAGGCCA TGCGCGACGG CGCCTACGAC
TTCATCCAGA AGCCGTTCGC GTCCCAGCAC CTGGTGAGCG TGGTGCAGCG GGCGCTGGAG
AAGCGCCGGC TCGCCATGGA GGTGCGACGG CTGCGCCGCC AGCTCGCCGC CAAGGGCGAC
CTGGAAAGCC GCATCGTTGG CCATTCCCCC GCCATCGTGG AGCTGCGCGA GCTGGTGCAG
AACGTGGCGG CGGTGCCCAC CGACGTGATG ATCTTCGGCG AGACCGGCAC CGGCAAGGAG
CTGATCGCGC GCTGCCTGCA CGACCTCTCC GGCCGGCGCG GGCCGTTCGT GGCGCTCAAT
TGCGGTGGGT TGCCGGAAAC CCTGTTCGAA AGCGAGATCT TCGGCCACGA GGCCGGTTCC
TTCTCGGGCG CCACCAAGCA GCGCATCGGC AAGATCGAAT ATGCCAATGG CGGCACGCTG
TTCCTCGACG AGATCGAGAG CATGCCCATG GCCATGCAGG TGAAGTTCCT GCGCGTGTTG
CAGGAGCGCG TGGTGGAGCG GCTCGGCTCC AACAAGGTCA TTCCGGTGGA CTTCAGGGTG
ATCGCCGCCA CCAAGGCCGA TCTTCTGGAG CTGTCGAGGG ACGGCCAGTT CCGCAGCGAC
CTGCATTTCC GCCTGAACAT CGTGACCATC GATCTGCCGG CGCTGCGCAA CCGGCGCGAG
GACATTCCGC TGCTGTTCGA ATATTTCGTC AACCAGGCGG CGACCCGCCT CAACCGCGAG
CCGCCGCCCA TTCGCGAGCA GGTCGTCCGT GAGCTGATCG CCCACAATTG GCCCGGCAAT
GTACGCGAGC TGCGCAACCA GGCCGAACGC TACGCGCTGG GCCTCAGATC CGCACCGGGC
TTCGAGGCGG CCGAGGGGCC GGTGTCGCTG GCCACCACGG TGGAGAATTT CGAACGCAGC
CTCATCGCCG AGGAGCTGAA GCGCAACGAC GGCAACATCT CCCGGACCGC CGAAGCCATG
GCCATCGCCA AGACCACCCT GTTCGACAAG ATCCGGAAGT ACGATATCCG GGTGAAGGAA
GGCTGA
 
Protein sequence
MVDADAIVIE DDEDVKLGCL QALALEGIKA IGYDSVEAVP RPLSRDFRGV IISDIRLPGM 
DGMSFLAKLT NHDPDLPVIM ITGHGDVATA VQAMRDGAYD FIQKPFASQH LVSVVQRALE
KRRLAMEVRR LRRQLAAKGD LESRIVGHSP AIVELRELVQ NVAAVPTDVM IFGETGTGKE
LIARCLHDLS GRRGPFVALN CGGLPETLFE SEIFGHEAGS FSGATKQRIG KIEYANGGTL
FLDEIESMPM AMQVKFLRVL QERVVERLGS NKVIPVDFRV IAATKADLLE LSRDGQFRSD
LHFRLNIVTI DLPALRNRRE DIPLLFEYFV NQAATRLNRE PPPIREQVVR ELIAHNWPGN
VRELRNQAER YALGLRSAPG FEAAEGPVSL ATTVENFERS LIAEELKRND GNISRTAEAM
AIAKTTLFDK IRKYDIRVKE G