Gene Xaut_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3897 
Symbol 
ID5422582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4315444 
End bp4316397 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content67% 
IMG OID640883153 
Productlipoyl synthase 
Protein accessionYP_001418778 
Protein GI154247820 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.972193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.576703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGG TCATCGACAC CCTCGCCCGC CCGCGCCACC CGGAAAAGGC CAACCGTCCG 
GAAACCGAGG TGCTGCGCAA GCCCGACTGG ATCCGCGTGA AGGCGCCGGG CTCGGCCGGC
TGGTCGCAGA CGGCGGAGAT CGTGCGGGCC AACGGCCTGC ACACCGTGTG CGAAGAGGCG
GGCTGCCCCA ATATCGGCGA GTGCTGGGAG AAGAAGCACG CCACCTTCAT GATCATGGGC
GACACCTGCA CGCGGGCCTG CGCCTTCTGC AACGTGCGCA CCGGCATGCC GGAAGCGCTC
GACCAGGGCG AACCGCAGAA GGTGGGCGAC GCCGTGGCCA AGCTCGGCCT CTCCCATGTG
GTCATCACCT CCGTGGACCG GGACGACCTC GCCGACGGCG GCGCCGAGCA CTTCGCCCGT
ACCATCGCCG CCATCCGCAA GGCGAGCCCC GGCACCACCA TCGAGATCCT CACCCCGGAC
TTCCTGCGCA AGGACGGGGC GCTTGAGGTG GTGGTGGCGG CCAGGCCCGA CGTGTTCAAC
CACAATCTGG AAACGGTGCC GGCCAAATAT CTCTCGGTGC GGCCAGGCGC GCGCTATTTC
CACTCCCTGC GCCTGCTGCA GAAGGTGAAG GAGCTGGACG GCTCCATCTT CACCAAGTCC
GGCATCATGG TGGGCCTCGG CGAGGAGCGG CCCGAAGTGC TCCAGCTGAT GGACGACCTG
CGCTCGGCGG AGGTGGATTT CATCACCATC GGCCAGTATC TCCAGCCCAC GCGCAAGCAC
CACAAGGTGG AGCGCTTCGT GACGCCGGAC GAGTTCAAGG CCTATGAGAC GGTCGCCTAT
GCCAAGGGCT TCCTGATGGT TTCGGCGAGC CCGCTCACGC GCTCGTCGCA CCATGCGGGC
GATGATTTCG AGAAATTGCG CGCGGCCCGG GTGGCGCGTC TCGGCCGGTC CTGA
 
Protein sequence
MVTVIDTLAR PRHPEKANRP ETEVLRKPDW IRVKAPGSAG WSQTAEIVRA NGLHTVCEEA 
GCPNIGECWE KKHATFMIMG DTCTRACAFC NVRTGMPEAL DQGEPQKVGD AVAKLGLSHV
VITSVDRDDL ADGGAEHFAR TIAAIRKASP GTTIEILTPD FLRKDGALEV VVAARPDVFN
HNLETVPAKY LSVRPGARYF HSLRLLQKVK ELDGSIFTKS GIMVGLGEER PEVLQLMDDL
RSAEVDFITI GQYLQPTRKH HKVERFVTPD EFKAYETVAY AKGFLMVSAS PLTRSSHHAG
DDFEKLRAAR VARLGRS