| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3893 |
|---|
| Symbol | |
|---|
| ID | 5422138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4312566 |
|---|
| End bp | 4313207 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640883149 |
|---|
| Product | nucleoside 2-deoxyribosyltransferase |
|---|
| Protein accession | YP_001418774 |
|---|
| Protein GI | 154247816 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG3613] Nucleoside 2-deoxyribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.38483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCT ACCTCGCCGG CCCCGAAGTG TTCCTCGACG ACGCGCGCGA GATCGGCCGG
CGCAAGGTGG AGCTGTGCAC CCGCTTCGGC TTCATCGGAC TCTATCCGCT GGACGGCGAC
CCGCTGCTGG ATGCGGCGGC GGGGGCCGCG AGCCACTCCA TATTCGCCGC CAACCTTGCC
CTCATGCGCT CCGCCGATGC GCTTATCGCC AATCTCACCC CATTCCGGGG CATCAGCGCC
GATCCGGGCA CCGCGTTCGA GGTGGGCTTC GCCTTCGCTC TGGGCAAGCC GGTGGCGGCC
TATTCCAACC TGCCGGGTGA GCTGAAGCAT CGCGCCCATT CCACCATCGG TGTGGCCGGC
GACGCCGAGG CTGTCCCCAC GCTCTTGGCC GATGGGCTGC ACGTGGAGGA CTTCGGCCAT
TTCGACAATC TCATGCTGGC GGAAGCGCTT GCCGCCTCCC GGCTGCCGGT GATCCAGGCC
CAGGCGCCTG CCGCCGACCC GTTCCGCGAC CTCACCCTGT TCGAGCAGGC GCTCTCCGTT
TTGGCCGAGG CCCGGTCCGC CGGCCGCCTT GGCACGACCC CATCCCTTTC CCATCCAGAA
CCCGCCGGAC AGGCGCACGG CGAGGAGACC TTCCATGGCT GA
|
|---|
| Protein sequence | MKLYLAGPEV FLDDAREIGR RKVELCTRFG FIGLYPLDGD PLLDAAAGAA SHSIFAANLA
LMRSADALIA NLTPFRGISA DPGTAFEVGF AFALGKPVAA YSNLPGELKH RAHSTIGVAG
DAEAVPTLLA DGLHVEDFGH FDNLMLAEAL AASRLPVIQA QAPAADPFRD LTLFEQALSV
LAEARSAGRL GTTPSLSHPE PAGQAHGEET FHG
|
|---|
| |