| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3890 |
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| Symbol | |
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| ID | 5422135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4309339 |
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| End bp | 4310709 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640883146 |
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| Product | pyruvate dehydrogenase subunit beta |
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| Protein accession | YP_001418771 |
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| Protein GI | 154247813 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.440755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.418556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG AAGTCCTCAT GCCGGCCCTG TCTCCCACCA TGGAGAAGGG CAATCTCACC
AAGTGGCTCA AGAAGGAAGG CGACACCGTC AAATCCGGTG ACGTGCTTGC CGAGATCGAG
ACCGACAAGG CCACCATGGA GGTGGAGTCC ATCGACGAAG GAATCCTCGG CCGCATCCTC
GTACCCGAGG GCGCCCAGGA CGTGGCGGTG AACACCCCCA TCGCCACCAT CCTCGCCGAC
GGCGAAGATG CGAACGCCGC TCCGGCTCCC GCCCCCAAGG CGGCCGAGAG CGCCCCGGCC
CCGGCCACAG CGCCCGCCCC CGCGGCGCCG GCGGTGATCG CCCCGCAGGC GGTGGCCCAG
CCCGATCCGG AAGTGCCGGC CGGCACCGAA TTCGTCACCC AGACCGTCCG CGAGGCCCTG
CGCGACGCCA TGGCCGAGGA AATGCGCCGC GACGGCGATG TCTTCGTCAT GGGCGAGGAA
GTGGCCGAGT ATCAGGGCGC CTACAAGATC ACCCAGGGGC TGCTCCAGGA GTTCGGCGAG
CGGCGCGTGA TCGATACCCC CATCACCGAG CATGGCTTTG CCGGCGTCGG CGTGGGTGCG
GCCATGGCGG GCCTGAAGCC CATCATCGAG TTCATGACCT TCAACTTCGC CATGCAGGCC
ATCGACCACA TCATCAACTC GGCGGCGAAG ACCCTGTATA TGTCGGGCGG GCAGATGCAC
TGCTCCGTCG TGTTCCGCGG CCCCAACGGC GCCGCCGCCC GCGTCGCCGC CCAGCACAGC
CAGGACTACA CCTCCTGGTA CTCCAACGTG CCCGGCCTGC GGGTGATCGC GCCCTATACG
GCGGCCGACG CCAAGGGCCT CCTGAAGGCC GCCATCCGCG ACCCCAACCC GGTCATCTTC
CTTGAGAACG AGATCCTCTA CGGCCACTCC TTCGAGGTGC CGAAGCTGGA TGATTTCGTG
CTGCCCATCG GCAAGGCGCG CATCGCCCGG AGCGGCAAGG ACGTGACCCT GGTTTCCTTC
TCCATCGGCA TGACCTATGC GCTGAAGGCG GCGGACGAGC TGGCCAAGCA GGGCATCGAG
GCGGAGGTCA TCGACCTGCG CACCATCCGC CCCATGGACG TGGACACCAT CATCGCCTCG
GTGAAGAAGA CCGGCCGCTG CGTGAGCGTG GAAGAGGGCT GGCCGCAGTC CGGCGTCGGC
GCCGAGATCG TCGCCCAGCT CATGGACAAG GCCTTCGACT ATCTCGACGC CCCGGTGCTG
CGCGTCACGG GCAAGGACGT GCCCATGCCG TACGCCGCCA ACCTCGAGAA GCTGGCCCTG
CCGACGGTCG CCGACGTGAT CGCGGCCGTC CACGCCGTGA CCTATCGCTG A
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| Protein sequence | MAIEVLMPAL SPTMEKGNLT KWLKKEGDTV KSGDVLAEIE TDKATMEVES IDEGILGRIL
VPEGAQDVAV NTPIATILAD GEDANAAPAP APKAAESAPA PATAPAPAAP AVIAPQAVAQ
PDPEVPAGTE FVTQTVREAL RDAMAEEMRR DGDVFVMGEE VAEYQGAYKI TQGLLQEFGE
RRVIDTPITE HGFAGVGVGA AMAGLKPIIE FMTFNFAMQA IDHIINSAAK TLYMSGGQMH
CSVVFRGPNG AAARVAAQHS QDYTSWYSNV PGLRVIAPYT AADAKGLLKA AIRDPNPVIF
LENEILYGHS FEVPKLDDFV LPIGKARIAR SGKDVTLVSF SIGMTYALKA ADELAKQGIE
AEVIDLRTIR PMDVDTIIAS VKKTGRCVSV EEGWPQSGVG AEIVAQLMDK AFDYLDAPVL
RVTGKDVPMP YAANLEKLAL PTVADVIAAV HAVTYR
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