| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3884 |
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| Symbol | |
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| ID | 5421902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4303751 |
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| End bp | 4305988 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640883140 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001418765 |
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| Protein GI | 154247807 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.234242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGC GCACACTTCC GCCCGGCGAC GGGCACATCG AGAAAGTCAC GCTCAAGGAG
GCGCTGGAAG AGCGCTACCT GGCTTACGCC CTCTCGACCA TCATGCACCG CGCCCTGCCC
GACGCGCGCG ATGGTCTCAA GCCGGTGCAC CGGCGCATCC TCCACGCCAT GCGCCAGCTG
CGGCTGGATC CGGGCCAGGG CTTCAAGAAG TCCGCCCGCG TGGTGGGCGA CGTGATCGGC
AAGTTCCATC CCCACGGCGA CCAGTCGGTC TATGACGCGC TGGTGCGCCT TGCCCAGGAT
TTCGCCCAGC GCTACCCGCT GGTGGACGGA CAGGGCAATT TCGGCAACGT GGACGGCGAT
AACGCCGCCG CCATGCGATA CACCGAGGCC CGCCTCACCG AGACCGCCCG CCTGCTGCTG
GACGGCATCG ACGAGGACGC GGTCGACTTC CGCCCGACCT ATGACGGCTC GGAAGAAGAG
CCTGCGGTGC TGCCGGCTGC CTTCCCGAAC CTGCTGGCCA ACGGCTCGCA GGGCATCGCG
GTGGGTATGG CCACCTCCAT CCCGCCCCAT AATGCCGCCG AACTGCTGGA CGCGGCGCTC
CATCTCATCG ACCATCCGGA GGCCCCGGCC TTCGACCTGC TCCAGTTCGT CCCCGGCCCG
GACTTCCCCA CCGGTGGCGT GCTGGTGGAG GACCCGGTGG GCGTGGCCGA GGCCTATGCC
ACTGGCCGCG GCTCGTTCCG CGTGCGGGCG CGCTGGGAGA AGGAGGAGAC CGGGCGCGGC
ACCTATGTGG TGGTGGTCAC CGAGATCCCC TACGGCGTCG CCAAGTCCCG CCTCGTGGAG
AAGATCGCGG AGCTGCTCAC CGACAAGAAG CTGCCGCTGC TCGCCGACGT GCGCGACGAG
AGCGCCGAGG ATATCCGCCT GGTGCTGGAG CCGCGCGCCC GCACGGTGGA TGCCGAGGTG
CTCATGGAGA GCCTGTTCAA GCTCACCGAG CTTGAGGCCC GCATCCCGCT CAACATGAAC
GTGCTGGTGC GCGGGCAGGT CCCCAAGGTG CTCTCCCTTT CGGAAGCGCT CCGGGAATGG
CTCGACCACC GCCGCGACGT GCTGCTGCGT CGCTCGCGCT ATCGGCTGGA GCAGATCGCG
CACCGGCTGG AGGTGCTCGG CGGCTACCTC ATCGCCTATC TCAACCTCGA CGAGGTGATC
CGCATCATAC GCGAGGAGGA CGAGCCCAAG CAGGAATTGA TGCGCACGTT CGAGCTGACC
GACGTGCAGA CGGAAGCCAT CCTCAACATG CGGCTGCGCT CCCTGCGCCG GCTGGAGGAG
ATGGAGATCC GCAAGGAGCA CGACGCCCTG AGCAAGGAGC AGGACGGCCT GAACAAGCTG
GTGGCCTCCG AGGCGGCGCA GTGGAAGTCC ATCGCCAAGG AAATCCGCGA GACCCGCAAG
ACCTACGGCC CCGAGACTGC CATCGGCCGG CGCCGCACCA CGTTCGCGGC GCCCCCCACC
TTCCATGAGG ACGCCTTCAC CGAGGCACTG GTGGAGCGCG AGCCGGTGAC CATCGTGGTC
TCCGCCAAGG GCTGGATCCG GGCGCTCAAG GGCCATGTGC AGGACCTGTC CAACCTGCAG
TTCAAGGGCG ACGACAGCCT GGGCCACGCC TTCTTCGCCG AGACCACCTC CAAGGTCATG
GTCTTCGCCT CCAACGGGCG CTTCTACACG CTGGAGGCCG CCAAGCTGCC CGGCGGGCGC
GGCCACGGCG AGCCGGTGCG CCTCATGATC GACCTGGAGC AGGAGGCGGA GATCGTCTCC
GTCTTCGCCT ATCAGCCCGG CCGCAAGCTG CTGTTGGCCT CCAAGGAGGG ACGCGGCTTC
GTGGTGGGCG AGGACGACTG CCTCGCCAAC ACCCGCAAGG GCAAGCAGGT GCTCGTCACC
GATCCGCCGG ACGCGGCGCT GGCGGTGCGC TTCGTGGAGG GCGACTGGGT GGCGGTGATC
GGCGACAACC GCAAGCTGCT GCTGTTCCCG CTCAACCAGG TTCCGGAAAT GACCCGTGGG
CGCGGCGTGC GTTTCCAACG ATACCGCGAG GGCGGGCTGT CGGACCTGAA GGCCTTCTCC
ATGGCCTCGG GCCTGACTTG GGAGGACACC TCCGGCCGCA CCTGGACCGT GACGGAGTTG
CTGGAATGGC AGGGCGAGCG CGCCTCCGCC GGTCGGCTGC CGCCCAAGGG CTTCCCCCGC
AGCAACAAAT TCAGCTGA
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| Protein sequence | MATRTLPPGD GHIEKVTLKE ALEERYLAYA LSTIMHRALP DARDGLKPVH RRILHAMRQL
RLDPGQGFKK SARVVGDVIG KFHPHGDQSV YDALVRLAQD FAQRYPLVDG QGNFGNVDGD
NAAAMRYTEA RLTETARLLL DGIDEDAVDF RPTYDGSEEE PAVLPAAFPN LLANGSQGIA
VGMATSIPPH NAAELLDAAL HLIDHPEAPA FDLLQFVPGP DFPTGGVLVE DPVGVAEAYA
TGRGSFRVRA RWEKEETGRG TYVVVVTEIP YGVAKSRLVE KIAELLTDKK LPLLADVRDE
SAEDIRLVLE PRARTVDAEV LMESLFKLTE LEARIPLNMN VLVRGQVPKV LSLSEALREW
LDHRRDVLLR RSRYRLEQIA HRLEVLGGYL IAYLNLDEVI RIIREEDEPK QELMRTFELT
DVQTEAILNM RLRSLRRLEE MEIRKEHDAL SKEQDGLNKL VASEAAQWKS IAKEIRETRK
TYGPETAIGR RRTTFAAPPT FHEDAFTEAL VEREPVTIVV SAKGWIRALK GHVQDLSNLQ
FKGDDSLGHA FFAETTSKVM VFASNGRFYT LEAAKLPGGR GHGEPVRLMI DLEQEAEIVS
VFAYQPGRKL LLASKEGRGF VVGEDDCLAN TRKGKQVLVT DPPDAALAVR FVEGDWVAVI
GDNRKLLLFP LNQVPEMTRG RGVRFQRYRE GGLSDLKAFS MASGLTWEDT SGRTWTVTEL
LEWQGERASA GRLPPKGFPR SNKFS
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