Gene Xaut_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3883 
Symbol 
ID5421901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4301935 
End bp4303746 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content71% 
IMG OID640883139 
Productchloride channel core 
Protein accessionYP_001418764 
Protein GI154247806 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.457213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCC CGCCCGCCGA TTCCGGATCT GCCGATCCTG CGCCGGCCGG TACCGGGGCG 
CCGGTCTCCA TCCTCGCCCG TTTTGTCGCC GCCGTCCGGG CCAGCGTGCG CGAGCGGGAA
GTTGCGCTGG TGGGGATCGC GGCGGTGATG GGCATGCTCG CCGGGCTCGC GGCCAGCGCC
ATGAGCCAGA CCACCCAATG GATGCACGAG GCACTGTTCC AGCTCGCCCC CGGCGACCGG
CTCAGCGCCG CTCCGGCCCT GGCCTCGACC TTGATGGTTC TGGTCCCGGT GGCGGGCGGG
CTGGCCATGG GGCTCATCGC CCTCGCCCTG AAGCGCTGGC GCCGACGCAA TTTCGTCGAC
CCCATCGAGG CCAATGCGCT GCACGGCGGG CGCATGTCGC TGACCGACAG CATCATCGTG
TCGCTGCAGA CCATGGTCTC CAACGGCTTC GGCGCGTCGC TCGGGCTGGA GGCGGGCTAT
TCGCAGATCG GCGGAGGCAT CGCCGCCCGC CTCGGACGGG CCTTCCACCT GCGGCGCAAC
GACCTGCGGA TCCTGGTGGG CGCGGGGGCG GCGGCGGGCA TCGGCGCGGC CTTCGATGCG
CCGCTCATGG GCGCCTTCTA CGGCTTCGAG ATCATCATCG GAAGCTATTC CATTCCGGCA
GCCGCCCCGG TGCTGGCGTC CACCGTCTCG GCGGTGATGG TGGCGCGGCT GCTCGGCGTC
CATGTGGATC CGCTGAACAT CCCGCTTGAT GTGGTGGTGC AGCCCCTCGA CATCCTGCCC
ATCGCGCTGC TGGGGCTGCT GGCGGCGGGG GTCGCCATCC TCATCATGCG CCTGGTCACC
GGGGTGGAGA TGCTGTTCGG CAAGAGCGGC ATTCCCGCGC CGCTGCGGCC GGCGGTGGCG
GGCCTTGGCG TCGGCGCGCT GGCGCTCTAC AGCCCGCAGG TGCTCTCCGA CGGCCATGGC
GCGCTGCACC TGCAGGTGGA CAGCCCGGTG GCGCTCTCGG TGGCGATCAT CTTCGGCCTG
AAGATCCTGG CCTCGGCCCT GTCCATCGGC TCGGGATTTC GCGGCGGCCT GTTCTTCGCC
TCGCTGTTTC TCGGGGCGTT GATGGGCAAG CTCTATGGCG GCGCGCTCGC CATGCTGTGG
CCGTCGCTCC AGCTCGATCC GGCGGTCACC GCGGTGGCCG GCATGGGGGC GCTGGCGGTG
GGCATCATCG GCGGGCCGCT CACCATGACC TTCCTGGTGC TGGAGATGAC GCGGGACCTC
GCCCTGTCCG GCTATGTGCT GGCGGCGGCG GTGGTGACCT CCCTCGCGGT GCGGGAGACC
TTCGGCTACT CCTTCTCCAC CTGGCGCTTT CACCTGCGCG GAGAGAGCAT CCGCAGCGCG
CAGGACGTGG GCTGGATGCG CGAGTTGACC GTCGCCCGCA TGATGCGCAC CGACATGGCC
ACCTTCCCCG AGCATGGCAC CATCGGCGCC CTGCGCACGG CCTTCCCGCT GGGCGCGCGG
CGGATGGTGG TGCTGGTGGA CGGCGCTGGC GCCTATGCCG GGCTGGTGCG TGTGGTGGAG
GCCCATGCGG CCGAGCACGA TCCCGCCGAA GCCGTCTCCC GGCTTGCCAC CCATCGCGAC
GACATGCTGC TGCCGGCCAT GAACGTGCAG GAGGCGGCGC TGGCCTTCGA TGCGGCCAAG
GCCGAGGATC TCGCCGTGGT GAACGACCGC GCCACCCGCC GCCTCATGGG CCTTTTGGGC
GAGGCCCACG TGCTGCGACG CTACGCCGAG GAGCTGGACA AGGCCCGGCA AGGTCTCGGC
GCGGAGGTCT GA
 
Protein sequence
MAGPPADSGS ADPAPAGTGA PVSILARFVA AVRASVRERE VALVGIAAVM GMLAGLAASA 
MSQTTQWMHE ALFQLAPGDR LSAAPALAST LMVLVPVAGG LAMGLIALAL KRWRRRNFVD
PIEANALHGG RMSLTDSIIV SLQTMVSNGF GASLGLEAGY SQIGGGIAAR LGRAFHLRRN
DLRILVGAGA AAGIGAAFDA PLMGAFYGFE IIIGSYSIPA AAPVLASTVS AVMVARLLGV
HVDPLNIPLD VVVQPLDILP IALLGLLAAG VAILIMRLVT GVEMLFGKSG IPAPLRPAVA
GLGVGALALY SPQVLSDGHG ALHLQVDSPV ALSVAIIFGL KILASALSIG SGFRGGLFFA
SLFLGALMGK LYGGALAMLW PSLQLDPAVT AVAGMGALAV GIIGGPLTMT FLVLEMTRDL
ALSGYVLAAA VVTSLAVRET FGYSFSTWRF HLRGESIRSA QDVGWMRELT VARMMRTDMA
TFPEHGTIGA LRTAFPLGAR RMVVLVDGAG AYAGLVRVVE AHAAEHDPAE AVSRLATHRD
DMLLPAMNVQ EAALAFDAAK AEDLAVVNDR ATRRLMGLLG EAHVLRRYAE ELDKARQGLG
AEV