Gene Xaut_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3876 
Symbol 
ID5422390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4294319 
End bp4295275 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content68% 
IMG OID640883132 
Productauxin efflux carrier 
Protein accessionYP_001418757 
Protein GI154247799 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.573481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.565732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC TGTTCGGCCT CGCCTTTCCC TTCTTCGGGC TGATCTTCCT CGGCTATTTC 
TGTGGCTGGC GGGTCCGGCT GCCGGAAAGC GGGCTCGCCT GGCTGACCTT CTTCGTCATC
TATGTGGCGC TGCCGGCGCT GTTCTATCGC ATCGTGGCGC AGACGCCGAT CCACGAGCTG
GCCAATCCCG CCTTCATCCT GGCGGTGGTG GCGTCCACGG CGACCACCTC CCTCATCGCG
CTCGGCATCG GCCTTTACTT TCGGCGCGGG CATGTAGGCG AGGCCGCCAT CGCCGTCACC
ATCGGCGCCT ATGCCAATGT GGGCTACATG GGGCCGGGCC TGACGCTGGC CGCCCTCGGT
CAGGCGGCGG CCACCCCGGC GGCGCTCATC TTCGCCTGCG ACAGCCTGCT GTTCTTCACC
ATCGTGCCCC TGCTCATGAG CATGCGCGGG CGGGGCGAGA GCCTGCTGCA CACCCTTGGC
CTCATTGCGA AGCGGGTTCT CACCCACCCC TTCAACATTG CGACCATGCT GGGGGTCCTG
GCAGCGGCGC TGGAGTTCCG CGAGCCGGAG CCGCTGTCGC GCATGCTGGA TTTCCTGCGC
AATGCCGCCG CCCCCTGCGC GCTGTTCGCG CTGGGCGTCA CCGTGGCGCT CCGGCCGCTG
AAGCGTGTGC CGGTGGAACT GGGGCCTCTG CTGGTGCTGA AGCTGGTGCT GCACCCGATG
ATCGCGCTGG TGTCGCTCAG CCTGTTCGGG CCGTTCTCGC AGGTCTGGAC CGAGACGCTG
CTGCTGATGG CGGCGCTGCC GCCGGCGCTG AACGTGTTCG TGCTGGCGCG GCAGTACCAT
GTGTTCATGG AGGAGGCGTC CGCCGCCGTC CTCCTCGGCA CCCTGTTCTC GGTGGTGACG
GTGACCGGCA TGCTCTATCT GCTGCGCGGG CACCTCATCC CGCTCAGCCT GTTCTGA
 
Protein sequence
MSDLFGLAFP FFGLIFLGYF CGWRVRLPES GLAWLTFFVI YVALPALFYR IVAQTPIHEL 
ANPAFILAVV ASTATTSLIA LGIGLYFRRG HVGEAAIAVT IGAYANVGYM GPGLTLAALG
QAAATPAALI FACDSLLFFT IVPLLMSMRG RGESLLHTLG LIAKRVLTHP FNIATMLGVL
AAALEFREPE PLSRMLDFLR NAAAPCALFA LGVTVALRPL KRVPVELGPL LVLKLVLHPM
IALVSLSLFG PFSQVWTETL LLMAALPPAL NVFVLARQYH VFMEEASAAV LLGTLFSVVT
VTGMLYLLRG HLIPLSLF