| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3853 |
|---|
| Symbol | |
|---|
| ID | 5420805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4271714 |
|---|
| End bp | 4272337 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640883109 |
|---|
| Product | heme exporter protein CcmA |
|---|
| Protein accession | YP_001418734 |
|---|
| Protein GI | 154247776 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
|---|
| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.113867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTGT CGGCTCTGGT GGGTGAAAAG CTGGCCTGCC GCAGGGGGTT CAAGCTGCTG
TTTGAGCATC TGGACGTGAC CGCGAGGTCC GGCCGGGCGC TGCTGGTGGT CGGGCCGAAC
GGCGCCGGCA AGTCCTCGCT GCTGCGCATC CTCTCCGGCC TGCTCGGGGC GACCGAAGGG
AAGGTGCGCC TCGATGGGCC TGGCCTTGAG GCCGCTGACA CCGGTGTGGG CGAGCACATC
CATTATCTCG GCCACGAGGA TGCGGTGAAG GGCGCGCTCA CGGTGCGGGC CAATCTCGCC
TTCTGGCGCA CCGTGCTCGG GCCCACCGGC CTGCCGGTGG AGGACGCGCT GGAGGAGGTG
GGCCTTGGCG GTCTCGGCGG GCTTCGGGCG CAGGTGCTCT CCGCCGGGCA GAAGCGCCGG
CTCGCCATCG CCCGGCTTCT GGTGTCGCGC CGTCCGGTAT GGGTGCTGGA CGAGCCCACC
ACGGCGCTCG ACGTGAAGGC GCAGGCGCGC TTTGCCGCCT TCGGCCGGGG CCATCTGGCG
GAAGGCGGCA TCCTGATCGC CGCCACCCAT GCCCCGCTCG ACCTGGGCGA TGTGGACGAA
CTCAGGCTGG GGGGCGTGGG GTGA
|
|---|
| Protein sequence | MAVSALVGEK LACRRGFKLL FEHLDVTARS GRALLVVGPN GAGKSSLLRI LSGLLGATEG
KVRLDGPGLE AADTGVGEHI HYLGHEDAVK GALTVRANLA FWRTVLGPTG LPVEDALEEV
GLGGLGGLRA QVLSAGQKRR LAIARLLVSR RPVWVLDEPT TALDVKAQAR FAAFGRGHLA
EGGILIAATH APLDLGDVDE LRLGGVG
|
|---|
| |