Gene Xaut_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3846 
Symbol 
ID5421552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4262234 
End bp4263484 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content71% 
IMG OID640883102 
Productlytic murein transglycosylase 
Protein accessionYP_001418727 
Protein GI154247769 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.977376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG TCCTGAACCG CCGCGCCTTT TCCCTCGGAC TTGCGGGTTC TCTTGCAGGC 
GCCGGATTGC TCACGGCGGC CCCCGCGCTG GCCCAGCAGG CGGCGCAGCC GTTCCCGCGC
TGGGTGGAGA CCTTCCGCGC CCGAGCCCGC GCGCGCGGCG TCTCGGATGC CACCTACAAC
CGCGTGTTCA ACGGCCTGAA GCCGGACACC GGCGTCTATG CGCAGGACCG CAACCAGGCC
GAGTTCACCG AGCAGAGCTG GCAGTATCTC AACCGCCGCG TCTCCGACTG GCGCATCGCC
ACCGGCAAGC AGCGCGCTCG CCAGTATGCC GGCCTGTTCG ACCGCATCGA GAAGGCGTTC
GGCGTCGATC GCCGGGTGAT GCTCGGCTAT TGGGGCATGG AGAGCGCGTT CGGCGACGTG
CTCGACAATC CCAAGCACAT GACCCCCGTC TTCCCCTCCC TCGCCGCTCT GGCCTGGGGC
GATGCGCGTC GGCGCAAATA CTGGGAAGCG GAGCTGCTCA ACGCCCTCGT CATCGTGGAG
CGCGGCTGGG GCACGCCGCA GGAGATGCGC GGGTCGTGGG CCGGGGCCAT GGGCCACACC
CAGTGGATGC CCGAGGTTTG GCTCAACATG GGCGTGGACT TCGACGGCGA CGGCCGCATC
TCGCCCTTCG GCAAGCCGGA CGATGCCCTC GCCGGCACCG CCAACTATCT GGTCCAGCGC
GGCAAATACC GCCGCGGCGA GCCGTGGGGC TTCGAGGCGA AGCTGCCGGC CGGATTCAAC
ACCGACCTGG CCGACAACAA GACCCGCCGG CCCCTCGCCC AATGGGGCGA GCTGGGGGTG
ACGACGGTGG AGGGCCAGTC GCTTTCCGGC TACGACGAGC CGGCGCGCCT GTGGCTACCC
GGCGGCGCCG GCGGTCCCGC GCTGCTGCTG CTCCACAATT TCTATGCGGT GCGCTCCTAC
AATCCCTCGT CCAACTACGC CCTCGCCGTG GTGCACCTGG GCGACCGAAT CATGGGCGAG
GGGCCGTTCG TGGCCTCCTG GCCCGGCGGC GAGCGGGCGC TGACCCTGGC GGAGCTGCAG
GAGGTGCAGC AGCGCCTCAC GGCGGCCGGC TTCGACACCG GGGGCGCCGA TGGGCGCGTG
GGCGCAGATA CCATGCGCGC GGTGCGCGGC TTCCAGCAGA AGGTGGGCAT CACCCCGGCG
GACGGCTACG CCTCCATCGC CGTGCTCAAC GCCCTGCGGC AGGGGCGGTA G
 
Protein sequence
MTLVLNRRAF SLGLAGSLAG AGLLTAAPAL AQQAAQPFPR WVETFRARAR ARGVSDATYN 
RVFNGLKPDT GVYAQDRNQA EFTEQSWQYL NRRVSDWRIA TGKQRARQYA GLFDRIEKAF
GVDRRVMLGY WGMESAFGDV LDNPKHMTPV FPSLAALAWG DARRRKYWEA ELLNALVIVE
RGWGTPQEMR GSWAGAMGHT QWMPEVWLNM GVDFDGDGRI SPFGKPDDAL AGTANYLVQR
GKYRRGEPWG FEAKLPAGFN TDLADNKTRR PLAQWGELGV TTVEGQSLSG YDEPARLWLP
GGAGGPALLL LHNFYAVRSY NPSSNYALAV VHLGDRIMGE GPFVASWPGG ERALTLAELQ
EVQQRLTAAG FDTGGADGRV GADTMRAVRG FQQKVGITPA DGYASIAVLN ALRQGR