Gene Xaut_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3789 
Symbol 
ID5422079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4195824 
End bp4196282 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content66% 
IMG OID640883045 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_001418671 
Protein GI154247713 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.557514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG AAGTTCTGGT TCTGGAGACC ACCAAGGGTC CGGTGACCAT CGCGTTCCGC 
CCGGACCTCG CTCCCGGCCA CGTGGCCCGC ATCAAGGAGC TGGTGTCCAC CGGCTTTTAT
GACGGCGTAC CGTTCCATCG CGTCATCGAC GGCTTCATGG CCCAGACCGG CGATCCCACC
GGCACCGGCA TGGGCGGCTC GGGCAAGAAG CTGAAGGCCG AGTTCAACCG CCAGCCCCAC
GTGCGCGGCA CCTGCTCCAT GGCGCGCGCG CAGAACCCCG ATTCCGGCGA CAGCCAGTTC
TTCATCTGCT TTGGCGACGC CCGCTTCCTC GACGGCCAGT ACACCGTGTG GGGCGAGGTG
GTCTCGGGCA TGGAGAATGT GGACCAGATC AAGCGCGGCG AGCCGGTGAA GGATCCCGAC
AAGATCGTCT CCGCCAAGCT CGCCCCCAAG GCGGCGTGA
 
Protein sequence
MSDEVLVLET TKGPVTIAFR PDLAPGHVAR IKELVSTGFY DGVPFHRVID GFMAQTGDPT 
GTGMGGSGKK LKAEFNRQPH VRGTCSMARA QNPDSGDSQF FICFGDARFL DGQYTVWGEV
VSGMENVDQI KRGEPVKDPD KIVSAKLAPK AA