Gene Xaut_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3784 
Symbol 
ID5425014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4191540 
End bp4192550 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content73% 
IMG OID640883040 
Producthypothetical protein 
Protein accessionYP_001418666 
Protein GI154247708 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.398301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AGCGCACGCC CCCCCGCCGG CCGCAGGTCT TCCGGCTCGA CGAAGCCGCC 
ATCACCATGG CGCCGCCGGA GCCGGTGGAG CCCGCCTTCC CCCTGCCCGT TCCGGCGCCC
GAGCCGCGCC GCAGCTGGGG TCTGTCGCTG GCCGGCCTGT TCTGGTCGGC GCTGGGCGGC
GTGCTGAGCC TGATGGCCTA TGTGGGCCTC AGCCAGCTCA TCACCGACCT GTTCGCCCGC
GCCGAATGGC TCGGCTATGT GGGCCTCGCC TTCACCGCCG CTCTGCTGGC CGCCGCCATC
GCCATCGTGG CGCGGGAAGT GGCGGGGATG GCCCGGCTGA CCAAGCTCGA CACCATCCGC
GCCAGCGCTG AAAAGGCCCT CGCGGAGGAC GACCGCGCCC TCGCCGAAAC CGTGGTGCGC
GACGTGTTGC GGCTGTCGGC GGAAACACCT TCGCTGGCTC GCGCCCGTAC CGATCTGGAG
GGGCACCTCA CCGGCATCAT CGATGGGGCG GACCTGGTGC GCCTGTCCGA GCGCACCTTG
CTGGCGGGCC TCGACTCCCG CGCCCGGCAG ATGGTGTCGG ACGCGGCGCG CAACGTCTCG
GTGGTTACCG CCGTTTCCCC GCGGGCGGCG GTGGACCTTG CCTTCGTGCT CTACAGCGCC
GTCACCCTCA TGCGCCGCCT CGCCCAGCTT TATGGCGGGC GGCCCGGGAC GCTGGGCACC
TTCAAGCTGG TCAAGCATGT GCTGGGGCAT CTTGCCATCA CCGGCGGCAT GGCGGCCGGC
GATACCCTGG TGCAGCAGAT CGTGGGCCAG GGGCTCGCAG CGCGGCTGTC CGCCCGCCTC
GGCGAAGGGG TGGTGAACGG GCTACTCACG GCGCGGCTGG GGCTTGCCGC CATCGCCGTC
ACGCGCCCCC TGCCCTTCAC CGCCCTGCCC GCGCCGCGCC TCGCGGACGT GGCCGGCGGC
CTCCTGCGCA AGGCGGAGGA AGACGAGGCC GCTGCCTCAC GCCGGCAATA G
 
Protein sequence
MSDERTPPRR PQVFRLDEAA ITMAPPEPVE PAFPLPVPAP EPRRSWGLSL AGLFWSALGG 
VLSLMAYVGL SQLITDLFAR AEWLGYVGLA FTAALLAAAI AIVAREVAGM ARLTKLDTIR
ASAEKALAED DRALAETVVR DVLRLSAETP SLARARTDLE GHLTGIIDGA DLVRLSERTL
LAGLDSRARQ MVSDAARNVS VVTAVSPRAA VDLAFVLYSA VTLMRRLAQL YGGRPGTLGT
FKLVKHVLGH LAITGGMAAG DTLVQQIVGQ GLAARLSARL GEGVVNGLLT ARLGLAAIAV
TRPLPFTALP APRLADVAGG LLRKAEEDEA AASRRQ