| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3578 |
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| Symbol | |
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| ID | 5422393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4000915 |
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| End bp | 4001850 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640882832 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001418463 |
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| Protein GI | 154247505 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0270096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC CTGCGCCTAC CGTCCTCGGT GCCAGCGAGG AGGCCATAAA CAAGGGCTCC
AAGAGCTTCG CCGCCGCCGC GCGCCTGTTC GGCCCGCGCA TGCGGGAAGA CGCGGTGATG
CTCTATGCCT GGTGCCGCCA CTGCGACGAC GTGGTGGACG GGCAGGAACT GGGGCACGGG
CGTGTCTCCA GCGCCGCCTC GCCCGCCGAG CGGCTCGATG GCCTCTATGA GGAGACCCGC
AACGCCTATC GCGGCGCGCC CTCCGCCCAT CCGGCCTTCG CCGCCTTCGC CGAGGTGGTG
AAGCGCAACG ACATTCCCGA GCGCTATCCC CTTCAACTGC TGGAGGGCTT CCGCATGGAC
GTGGAAGGCC GGCGCTACGA CACCCTCGAT GACACGCTCA CCTATTGCTA CCACGTGGCC
GGCGTGGTGG GCGTGATGAT GGCCCTCATC ATGGGCGCGC GGGATGAAGT GGTGCTGGAC
CGGGCGAGCG ACCTCGGCCT CGGCTTCCAG CTCACCAACA TCGCCCGCGA CGTGATGGAG
GATGCCGCCA TCGGCCGCAT CTACCTGCCG GCGGCCTTCC TCGCAGAGGC CGGCGTGCCG
GAGGCGGCCA TCGCCGCGCC GGAGCACCGC GCGGCGGTGG CCGGCGTGGT GGCGCGGCTG
CTCGACGTGG CCGAGCCCTA TTACGACCAG GCCCTCATCG GCATGGCCGC CCTGCCGTTC
CGCGCGGCGG CAGCGGTGGG CGCGGCGCGT GGGGTCTATC GCGCCATCGG CATCGAGGTC
CGTAAGCGCG GGCCGAAGGC GTGGGATACC CGCGTCTCCA CCTCCACGGC CCAGAAGGCC
GGCTTTCTCG CGGGTGGCCT CGCGCAGGCC CTCGCCACGC GGTTCAGAGG CGCGCCGCCG
CCCCGTCCCG CGCATCTTTG GACGCGTCCC GCATGA
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| Protein sequence | MSTPAPTVLG ASEEAINKGS KSFAAAARLF GPRMREDAVM LYAWCRHCDD VVDGQELGHG
RVSSAASPAE RLDGLYEETR NAYRGAPSAH PAFAAFAEVV KRNDIPERYP LQLLEGFRMD
VEGRRYDTLD DTLTYCYHVA GVVGVMMALI MGARDEVVLD RASDLGLGFQ LTNIARDVME
DAAIGRIYLP AAFLAEAGVP EAAIAAPEHR AAVAGVVARL LDVAEPYYDQ ALIGMAALPF
RAAAAVGAAR GVYRAIGIEV RKRGPKAWDT RVSTSTAQKA GFLAGGLAQA LATRFRGAPP
PRPAHLWTRP A
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