| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3575 |
|---|
| Symbol | |
|---|
| ID | 5421502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 3996879 |
|---|
| End bp | 3998048 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640882829 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_001418460 |
|---|
| Protein GI | 154247502 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATA CGCCGCCCTC CCCTACCCCC GCCCCGCGCG GTCCGCTCGC AGGCGTGCGC
GTCATCGACC TGTCCCGGCT CGCGCCGGGC CCCTATTGCA CCATGCTGCT GGCGGACCTC
GGCGCCGAGG TGATCGTGGT GGGCGGCGGG CGCGCCGGGG TCGCCATCGC GGAATTCTCC
CGCGGCAAGC GCCACGTGGC CCTCAACCTC AAGGCCCCGG AAGGCCGCGC CGCGCTCCAC
GCGCTGGTGA AAGCGGCGGA CGTGCTGGTG GAGGGCTTCC GCCCCGGCGT GGCCGAGCGC
ATCGGCGCGG GATATGCGGA GCTGTCGGCG CTCAATCCCC GCCTCGTCTT TTGCGCCCTC
ACCGGTTTCG GCCAGGATGG CCCGCGGGCC AAGGAGGCCG GCCACGACAT CACCTATCTC
GCCTTGTCCG GCGTGCTCGG CGGCCTCGGC CCCAAAGGAG CGCCGCCGGA GGCGCCGCTG
AACCTGGTGG CGGATTTCGC CGGCGGCAGC CTGATCGCCG CCATCGGCAT CCTCGCGGCG
GTGATCGAGG CCAGGGCCTC GGGGCGCGGC CAGTTCATCG ATGCCGCCAT GATGGACGGC
GCCCTCTCCC TCATGGCCAT GCACCTGCCC CTCTGGAAGA CGCCCCACTG GCCGGAGCGC
GGCGACGGGC TGCTGGGCGG CGGGGCGCCG TTCTACCGCA CCTATGCCTG CGCCGACGGC
GGCTTCATGG CCGTGGGGGC GCTGGAGCGC GGCTTCTTCG AGAGCCTGTG GCGCACGCTC
GATCTGGGCG AGGCTCCGGA CCACATGCGT CGCGACCTGT GGCCGGGGAT CGAGCGCCAG
CTGGCGGAGA CCTTCGCCAG CGCGCCGCGC GACCATTGGA CCGCCCTGTT CGCAGGCACG
GACGCCTGCG TCGCCCCGGT GCTCGCGCCC GACGAGGTCT GGAGCGATCC CCATGTCGCC
GCGCGCCACC CCGGATGCGG CCCCCATCGC GTGCCCGCCG TGCCGCGCCT CTCCCGCACC
CCGGCCGAGG CGCGCCCGCT GGATCTCTCC GACCGCACCG CCGAGGTGCT GCGCGAGATC
GGCCTCAGCG ATGAGGTGGC CCGCGCCGCC GCAGCGCCGG ATGAAGGCGA GGGCCGCTCC
GGCCTCGCCT GGCCACCGGA GCTGCGGTAG
|
|---|
| Protein sequence | MPDTPPSPTP APRGPLAGVR VIDLSRLAPG PYCTMLLADL GAEVIVVGGG RAGVAIAEFS
RGKRHVALNL KAPEGRAALH ALVKAADVLV EGFRPGVAER IGAGYAELSA LNPRLVFCAL
TGFGQDGPRA KEAGHDITYL ALSGVLGGLG PKGAPPEAPL NLVADFAGGS LIAAIGILAA
VIEARASGRG QFIDAAMMDG ALSLMAMHLP LWKTPHWPER GDGLLGGGAP FYRTYACADG
GFMAVGALER GFFESLWRTL DLGEAPDHMR RDLWPGIERQ LAETFASAPR DHWTALFAGT
DACVAPVLAP DEVWSDPHVA ARHPGCGPHR VPAVPRLSRT PAEARPLDLS DRTAEVLREI
GLSDEVARAA AAPDEGEGRS GLAWPPELR
|
|---|
| |