Gene Xaut_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3560 
Symbol 
ID5421651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3975087 
End bp3976007 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content64% 
IMG OID640882814 
Productglycosyl transferase family protein 
Protein accessionYP_001418445 
Protein GI154247487 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.480294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.632112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCG CCGTCGTCGT CATCCCAACC TACAATGCCA GTCGTCATTT GGGAGACCTG 
CTGCCTGCGC TGCAGCAGCA GGGGCTGCGT CCGGATCAGT ATTTCGTCAT CGACAGTTCG
TCGGGCGACG ATACGCTCGC GCGTGTCGGG GCGTTCGGGG CACGCACCCA CCGCATCGAC
AAGAAGGAGT TCAACCACGG CGGAACGCGG CGCCTCGCCG CCAACCTCAA TCCGGAGGCG
GAATTCCTGA TCTACATGAC TCAGGATGCC ATTCCCGAGC CGGGCGCCAT CAAGCGCCTT
CTCGAGGCGT TTGCGGACGA CAAGGTGGGT GTCGCCTACG GGCGGCAGCT GCCCCGTGCC
AAGTCCTCGG CCATCGAGCG GCACGCCCGG CTTGCGAACT ATCCCGCGAT CAACGAGGTT
CGCAGCATCG AGGACGCCAG CCGGCTCGGG ATCAAGACCG TGTTCTGCTC CAACTCCTTC
GCCGCCTATC GGCGCACCGC CCTTGAAGGC GTCGGCAACT TTCCGGAAGA CAACTACTTC
GCTGAAGATC AGGTGGTCTC GGGCCGCATG TTGCTGAGCG GATGGCGCAT TGCCTATGTC
GGGGATGCCG CAGTCGTGCA CAGCCACGAC TACACCATCA AGGAGGACTT CCGGCGCTAT
TTCGACGTGG GCGTGTTCCA CGGCCGAAAC CCGTGGCTGC TGGAGAAGCT TGGCAAGGCC
GAGGGCGCGG GCATGGCCTT CATCAAGTCC GAGACCGCGT ATCTGCTGAA GCACGACCCG
CTGGCTCTGC CGTCGGCGGG CGTGCGCACG CTGGCGAAGT ATGTCGCCTA TAAGCTCGGG
CAGAGGGAAG CCAAGCTCTC GCCGAAGACC AAGGCGTTCC TGAGCATGCA GCCGGGCTAT
TGGCGCAATC AGATCAGGTG A
 
Protein sequence
MDRAVVVIPT YNASRHLGDL LPALQQQGLR PDQYFVIDSS SGDDTLARVG AFGARTHRID 
KKEFNHGGTR RLAANLNPEA EFLIYMTQDA IPEPGAIKRL LEAFADDKVG VAYGRQLPRA
KSSAIERHAR LANYPAINEV RSIEDASRLG IKTVFCSNSF AAYRRTALEG VGNFPEDNYF
AEDQVVSGRM LLSGWRIAYV GDAAVVHSHD YTIKEDFRRY FDVGVFHGRN PWLLEKLGKA
EGAGMAFIKS ETAYLLKHDP LALPSAGVRT LAKYVAYKLG QREAKLSPKT KAFLSMQPGY
WRNQIR