Gene Xaut_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3558 
Symbol 
ID5421883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3972473 
End bp3973921 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content66% 
IMG OID640882812 
Producthypothetical protein 
Protein accessionYP_001418443 
Protein GI154247485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.428409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.497656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCCC CTGCTCCGGT GCGTCCGCGC GCTGATTGGC TGAAGTTCTG GCGCGGGCTA 
AGGGCCGGAC CGTCGCGGCG GCGAGTGCCG CGGTGGGTGG TGCCGCTGAC CGGCGTCGTT
CTTGCCGCGA GCCTGCTGTC GCGCTCCTAC GGCACAGAGG TCAAGGCGCT CCGTTTCGAC
CCCGCCGATC CGGTGGTGGC GCGGGCGGAG CCGCTCATCA TCGGCGCGAA CGTGCATTTC
GGCCTGCGCC GCGTGCTCGG CTTCACCTCC GACGAGGTCG GCCTCGACGG GCTGGCGGCC
CTCGGCGCGG ATTCCTTCCG TGATTTCCTG CCGTGGCCCT CGTTCGTGCC CGATGGCGAA
GGGCAGCGGC TGGTCTATTC GCAGCGGTTG ATGCGCTTCC TGGGCCGGAC CAAGCTGTTG
CCGGTGCTGA ATGTCGGCCA GCCCAACAGC AACGTTCCCG GCGGCGTTCC CCCGGTGTCG
GACCAGGGCC TCGTGACCTT CGCAGCCTAT CTGCGTGAAG CGGTGCGGCT CACCGAGGCG
CATCGGCCCA TCTATGAGAT CTGGAACGAG TGGAACATCC ATTGGGGCTC GGGACCGGTG
CTGCCGCGCC TGACCGGCGA GGGAGAGGCA AGCGATCCGC GCGCCGCGGT TCATTACGCG
CGGGTTGCCC AGGCGGGCGT GCGCGCGATC CGGGAGGTGG CCCCCCACGC GCGGATTATC
GTGGGTGCGG TCGGCGACGA TGCGGGATGG GCCTGGACCA AGTCCATCGT GAGACGCGGA
GCGCTTCAGG GCGCAGATGG GCTTTCGGTG CACGTCTACA ACCACTGCCT CAACGCCCGC
GATCGCACGG CGCGCGAACT GATCCAGCGC GTGGAAGCCC TGCAGCAGGC GCTGAAAAGC
ACGGCCGGCG GCGCGGAGAC GCCCATCTAC ATCACCGAAT TCGGATGGCC GGTCTTTCCG
CAGCGCTGCA CGCTGGACGA GACGCAGGCC GCGCATAACG TGGCGCAATT CATCCTGCTC
GCCGCGCCGG TGCCGTGGAT CAAGGGCATC TGGGTGCACA GCATGAAGGA TGGCGGGAAC
AATCCCGACG ACATCGAGGA TCATTTCGGG CTGTTCCGCT TCGATAACAC GCCGAAACCG
GCGGTCTGCT TCTTCCGGGA GGCCGCAAAG ATCGTGCGTT CGGCTCGATC GATCGAGGTG
GCGGAACCGT TCGATGGCGT GTTTGCCGCG CGTGCGCGCG GACAAGATGG GCGCCAGCGG
CTCGTGCTTT GGACATCCAA CCGGTTTGTC GAGGCCCGTT ACCGTCTGGA CAAGGGACAA
GGACAAGGGC GGCTGATGTG TGGAGGAACA ATCCAGGTGG CGAGCGAGAA GGAGGCTGCA
TTGTCGTCGC AGCCGCTGAT CATCGATTTT GATGGTGATG CTGTGGTCAA GATCGAAATC
TCGATTTAG
 
Protein sequence
MRAPAPVRPR ADWLKFWRGL RAGPSRRRVP RWVVPLTGVV LAASLLSRSY GTEVKALRFD 
PADPVVARAE PLIIGANVHF GLRRVLGFTS DEVGLDGLAA LGADSFRDFL PWPSFVPDGE
GQRLVYSQRL MRFLGRTKLL PVLNVGQPNS NVPGGVPPVS DQGLVTFAAY LREAVRLTEA
HRPIYEIWNE WNIHWGSGPV LPRLTGEGEA SDPRAAVHYA RVAQAGVRAI REVAPHARII
VGAVGDDAGW AWTKSIVRRG ALQGADGLSV HVYNHCLNAR DRTARELIQR VEALQQALKS
TAGGAETPIY ITEFGWPVFP QRCTLDETQA AHNVAQFILL AAPVPWIKGI WVHSMKDGGN
NPDDIEDHFG LFRFDNTPKP AVCFFREAAK IVRSARSIEV AEPFDGVFAA RARGQDGRQR
LVLWTSNRFV EARYRLDKGQ GQGRLMCGGT IQVASEKEAA LSSQPLIIDF DGDAVVKIEI
SI