| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3553 |
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| Symbol | |
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| ID | 5422510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3967526 |
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| End bp | 3968083 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640882807 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001418438 |
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| Protein GI | 154247480 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.197344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCG AAAGGCTGGC GATTCCCGAG ATCGTCAAGA TTACTCCGGC GCGCTTCGGC
GACGCTCGCG GCTATTTCTC TGAAGTTTTT AAGGATGAAT GGTTCCGGAA GAATGTTTCC
GACTCGACCT TCATCCAGGA CAACCAATCC CTTTCTTCAA CGGTGGGCAC GGTGCGGGGG
CTGCATTTCC AGCTCGACCC ATTCGCCCAG GGCAAGCTGG TGCGCTGCAC GGCCGGCGCC
ATCTTCGACG TCGCGGTGGA CATCCGGGTG GGTTCGCCCA CGTTCGGCCG CTGGGTCGGC
GTGGAATTGA CCCCGGAAAA TGGCGACCAG CTCTGGATTC CTCCGGGCTT CGCACACGGT
TTCGCGACGC TGGTTCCTGA TTCCGTCATC TTCTACAAGG TGACCGCTCC CTACAGCGCA
GCCCATGACC GCGGCCTGCT GTGGAACGAC CCCGAGATCG GCATCGACTG GCCCCTTAAG
ACGGGGCAGG CGGTGCTTTC GGAAAAAGAC AAGGTTCAAC CGCGGCTGGC GGATCTGCCG
CCCAGCTTCG CTTACTGA
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| Protein sequence | MKLERLAIPE IVKITPARFG DARGYFSEVF KDEWFRKNVS DSTFIQDNQS LSSTVGTVRG
LHFQLDPFAQ GKLVRCTAGA IFDVAVDIRV GSPTFGRWVG VELTPENGDQ LWIPPGFAHG
FATLVPDSVI FYKVTAPYSA AHDRGLLWND PEIGIDWPLK TGQAVLSEKD KVQPRLADLP
PSFAY
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