| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3552 |
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| Symbol | |
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| ID | 5422509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3964638 |
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| End bp | 3966932 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640882806 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001418437 |
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| Protein GI | 154247479 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.510582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCAGT CTCCGAAACG GTCGAGCGGG GGGCTTCGCT ACGAAGGTAG CTCTCAAAGC
GAGAGTTCCA TTCCTTCCAT CGATTTCTCT GGCATGCTGG CGGCCGTCCG CAGGCAGATG
CGGCCCGTAC TGATCGGGAC CTGCATCGGC GCCGCGCTCG GACTGGCGTA TTTCATCGCC
AAGACTCCCG TTTATTTCGC CGGCACACAG TTGCTTCTCG ACAGCAAGTC GAAGGTCAAC
GACGAAGTGG CCGTGACCGC CCTGTCGGAG CTGGGCCTCG ACACCGGCGC CGTCGACAGC
CAGGTCGAAG TGCTGAAGTC CATGAACATC GCCAATTCGG TGATCGCCAA GGTCGGCCTC
GACCGGGTGC TGGATGACGA CAACGTGCAG TCGGCCGTCG CCAGTGGCAT CTCGGCGGTG
AAGTCCGGCA TCCGTGCCGT CAAGGAAGCT ATCATTCCCC CCCGCAAGCT GACGCCGGCG
GAGGAGGAGG CGGGGAAGCG CGAGGCGGCG CTGCTCTACC TGAACAACAA TCTGTCGCTC
AAGCGCGTCG GCCGGACCTA CGTGATCGAG ATCGGATTCA CGTCGACCCA GGCCGACAAG
GCGGCGCAGA TCGCGAATGC CTATACCCAG GCCTATGTGG ACGACCAGTT CTCCGCCAAT
TTCGACGCGA CGCGCCGGGC TAGCGACTGG CTGCTGCCGC GCATCCAGGA ATTGCGCCAG
AAGGCAATCG AGACCGATCT CGCGGTCCAG AGCTTCCGCG GCGAGAAGGG GTTGATCACC
ACCTCCACCG GCTCCCTGGT CAATGAGCAG CAGGTTGGCG AAATCAACAC CCAGCTGGTG
CTCGCCCGAT CGGACGTGGC GCGGGCGGGC GCGAAATATG ACCGCATCCA GTCCATCATC
TCGTCCGGCC AGATGGATGC CGCGGTGTCT GAGGCCATCG ACAATCCCAT CATCGTGGAA
TTGCGGAACA AGGCGACCGC CGCCGCCAAG ACCGAATCGG AACTCGCCAG CAAGCTCGGC
CCCACCCATT ATCAGGTGCT GCGGCTGCGG TCCGATATCG CCGAATATCA GCGGCTGATC
TTCAGCGAGC TTGGTCGCAT CGCCGAAAGC TACCGCAGCG AGCGGGACAT CTCTCTGGCC
CGCGAGCGGG CTCTCGAAGC CCAGCTGAAG AGCCAGGTCG GCCTGTCCGA CGTGGCCAAC
AAGGACAAGG TGGCCCTTCG CGAACTGGAG CGCGAGGCTG ATACCTACAA GAACCTCTAT
GAGACCATGC TGCAGCGGTA CCAGGAATCC CTGCAGAAGC AGTCCTTCCC GGTCTCCGAG
GCTCGGGTGA TTTCGGTTGC GGTGACGCCT TCGCTGCCGG CCGCTCCGAA GCTGGTTCTG
TCCCTCATCC TCGGTTCGAT CGTCGGCTTC ATTGGTGGGG CCGGATATGG CGCCGTGCGC
GAGCTCAGGG ACCTTGGGTT CCGTTCCGCG TCGCAAATCC GCGATCTGCT CAGGCTCGAG
TGCATCGGCG TCATGCCGCG GATCTCGGCC CGGCAGTTGG CCATGGTGCC GCCCCTCTCC
AGCACCGGTC CGAACCAGGT GGGTGGGTCG GCCATGATGC GCTATGGCAC CAACCACATC
CTTTCGCCGT TCGCGGAGAC GTTGCGCAGC GCCAAAGTCG CGGTGGACTT CGCCGTGGGT
GAGAAGGCGC CCAAGATCAT CGCCCTTGCA TCGGTCCTGC CAACCGAGGG CAAGTCGACC
ATCAGCAAGA ATTTTGCCTC CATGCTGGCG CAGCTGGGCA CGCGCACGGT GCTGATCGAC
GCGGACCTGC GCTTTCGCGG GCTGAGCGAC GATGTCACCC CGCACGCGCA AAAGGGCTTG
TTCCACATCC TCAGTGAGGG CGAGCCGGTT TCCTCCGTGA TGAAGGTGGA GCCGGAAACG
GGGCTGTTCT TCATTCCCGC GGGCTCCGAT ATCGGCAGCG CCCACACGAG CAATCTCGTG
TCTTCGCCGG CCATGGGGCA GCTTCTCGCG GAAATCGGGG TGAACGCCGA CTATATCATC
ATCGATCTTC CGCCCCTGGG GCCGGTGGTG GATGTGCGCG CCGCCGTCAA GTATTTCGAT
GGTGTCCTGT TCGTTCTCGA ATGGGGTGCG ACGTCCCGCG ATCTGGTGGT GGATTCTTTC
GAGGCCAATC CGCAGGTCTA TGAGAAGTGC ATCGGCGTGA TCCTGAACAA GGTGGATACG
CATCGGCTGC ATTTCTACAC CAGCAAGGTG CCGCAGGACG GGCTGCACAA GAAGTACGCC
GCCTATTACG GCTGA
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| Protein sequence | MLQSPKRSSG GLRYEGSSQS ESSIPSIDFS GMLAAVRRQM RPVLIGTCIG AALGLAYFIA
KTPVYFAGTQ LLLDSKSKVN DEVAVTALSE LGLDTGAVDS QVEVLKSMNI ANSVIAKVGL
DRVLDDDNVQ SAVASGISAV KSGIRAVKEA IIPPRKLTPA EEEAGKREAA LLYLNNNLSL
KRVGRTYVIE IGFTSTQADK AAQIANAYTQ AYVDDQFSAN FDATRRASDW LLPRIQELRQ
KAIETDLAVQ SFRGEKGLIT TSTGSLVNEQ QVGEINTQLV LARSDVARAG AKYDRIQSII
SSGQMDAAVS EAIDNPIIVE LRNKATAAAK TESELASKLG PTHYQVLRLR SDIAEYQRLI
FSELGRIAES YRSERDISLA RERALEAQLK SQVGLSDVAN KDKVALRELE READTYKNLY
ETMLQRYQES LQKQSFPVSE ARVISVAVTP SLPAAPKLVL SLILGSIVGF IGGAGYGAVR
ELRDLGFRSA SQIRDLLRLE CIGVMPRISA RQLAMVPPLS STGPNQVGGS AMMRYGTNHI
LSPFAETLRS AKVAVDFAVG EKAPKIIALA SVLPTEGKST ISKNFASMLA QLGTRTVLID
ADLRFRGLSD DVTPHAQKGL FHILSEGEPV SSVMKVEPET GLFFIPAGSD IGSAHTSNLV
SSPAMGQLLA EIGVNADYII IDLPPLGPVV DVRAAVKYFD GVLFVLEWGA TSRDLVVDSF
EANPQVYEKC IGVILNKVDT HRLHFYTSKV PQDGLHKKYA AYYG
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