| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3548 |
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| Symbol | |
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| ID | 5421973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3959107 |
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| End bp | 3959673 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640882802 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001418433 |
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| Protein GI | 154247475 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.635289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCT TTCAAGCGCT CGACCTGCCA GAGGTCATCC TCGTGACGCC GCGCCGCTTC
GGCGACGCGC GCGGCTATTT CTGCGAAACC TACGTCAAGC CGCTCTATGC GGCGAACGGG
ATCGTCGCCG ATTTCGTACA GGACAACGAA TCGCTGTCGG CGCTGCCGGG CACGGTGCGC
GGCCTCCACA TGCAAGCGCC CCCCTTCGCG CAGGCCAAGC TGGTGCGGGT GCTGAGCGGC
GCCATCTTCG ACGTGGCGGT GGATGTGCGG AAGGGCTCGC CCACCTACGG CCGCTGGGCC
GGCGCCCGCC TCACCGCCGA GGGCGGCGAA CAGCTGTTTG TGCCGCAGGG TTTCGCCCAC
GGCTTCTGCA CCCTCGCCCC CGACACGCGC GTCGCCTATA AGGTGGACGC GTTTTATGAT
CGGGCGAGCG AATGCGGGAT TATCTGGAAC GATCCCGACC TCGCCATCGA CTGGCGCTTC
ACCGGCGAGA CCATTCTCTC CGACAAGGAC CGGATATTGC CTCGCCTCAA GGATTTCGAC
AGTCCCTTCG TGCATTCGAA CGGATAG
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| Protein sequence | MTAFQALDLP EVILVTPRRF GDARGYFCET YVKPLYAANG IVADFVQDNE SLSALPGTVR
GLHMQAPPFA QAKLVRVLSG AIFDVAVDVR KGSPTYGRWA GARLTAEGGE QLFVPQGFAH
GFCTLAPDTR VAYKVDAFYD RASECGIIWN DPDLAIDWRF TGETILSDKD RILPRLKDFD
SPFVHSNG
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