Gene Xaut_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3546 
Symbol 
ID5422445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3957932 
End bp3958831 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID640882800 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001418431 
Protein GI154247473 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCA TCCTCCTGTT TGGCGCCGGC GGCCAGCTCG GGCGCGAGGT AACGGCGCTC 
GCCGCCGAGC GCGGCCTTGA TACGGTCGGG CTTGGCCACG ACGCTTTGGA CATCGCTGAT
CCGGTGGCGG TGGCCCGGGC GATCGAGGCG GCGCGGCCCG ATGCGCTGAT CAACGCCGCT
GCCTATACCG CCGTGGACAA GGCCGAGACC GAACAGAAAA TGGCGGCGCG CATCAATGCC
TTCGCCCCCG GCCTGATCGC CGAGCGCTGC GCCCGCTACC GCACCCCCCT CATCCATGTC
TCCACCGACT ATGTGTTCGA CGGCACCAAG GCCGGCGCCT ATGTGGAGGC GGACCCCATC
GCCCCGCTGG GCGTCTACGG CCGCACCAAG GCCGCCGGCG AGGCAGCGGT GCGCGCGGCC
AGCGAGCGGC ACGTCATCGT GCGCACCTCG TGGGTCTACG GCGCCCACGG CAACAACTTC
CTGAAGACCA TGCTGCGGCT CGCCGCTGAG CGGGACCTGC TGAAGGTGGT GAGCGACCAG
CGCGGCTGCC CCACCGCGAC GCGCGACCTC GCCGAGGCGG TGCTGGCGGC AGCACAAGCC
GCTGCACGAG GCGACGCCCG CTGGGGCACC TACCATTTCG CCGGAACCGG CGCGACCACC
TGGCACGGCT TCGCCAGCGC CATCGTGGCG GCAGCGGCCG TGCACACCGG CAAGACGCCG
GAAGTCGCAC CCATCACCAC CGCCGAGTAT CCCACGCCGG CGCAGCGGCC GAAGAACTCC
GAACTGGCCA GCGACCTGTT CGAGCGCACC TTCGGCGTCC GGGCCGCGCC GTGGGAACAG
CGCGTGGGCG AGGTCGTGGA CGCGCTGCTG GCGCACCAAG CCCCCGTGGA AGCAACCTGA
 
Protein sequence
MTRILLFGAG GQLGREVTAL AAERGLDTVG LGHDALDIAD PVAVARAIEA ARPDALINAA 
AYTAVDKAET EQKMAARINA FAPGLIAERC ARYRTPLIHV STDYVFDGTK AGAYVEADPI
APLGVYGRTK AAGEAAVRAA SERHVIVRTS WVYGAHGNNF LKTMLRLAAE RDLLKVVSDQ
RGCPTATRDL AEAVLAAAQA AARGDARWGT YHFAGTGATT WHGFASAIVA AAAVHTGKTP
EVAPITTAEY PTPAQRPKNS ELASDLFERT FGVRAAPWEQ RVGEVVDALL AHQAPVEAT