| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3536 |
|---|
| Symbol | |
|---|
| ID | 5421291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 3946444 |
|---|
| End bp | 3946878 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640882791 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_001418422 |
|---|
| Protein GI | 154247464 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.806394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAA CGCCGGCTTA CGACCCCAGC AACATCTTCG CCAAAATCCT GCGGGGCGAG
TTGCCGGCGC ACAAGGTCTA TGAGGACGAC AAGGCCGTCG CCTTCCTCGA CATCATGCCT
CGCGCGCCGG GCCATACCCT CGTCATTCCC AAGAATCCTG CCCGCAACAT CCTCGATATC
GACCCCGAGG ACCTCGCCTA TGTGGCGAAG ATCGCCAAGA AGGTGGCCAT CGCCGCCAAG
GCGGTGTTTG CGGCCGATGG CGTCACCGTG CAGCAATTCA ACGAGGAAGC TGGCGGCCAG
GTGGTGTTCC ACCTCCATGT CCACGTCATC CCGCGCCACG CTGGGCAAGC CATGAAGCCG
GCCGCGAGCG TCATGGAGAA GCCCGAGGTG CTGGCCGAGC ATGCAGCGCG GCTGAAAGCC
GCCCTGGCCG GCTGA
|
|---|
| Protein sequence | MTATPAYDPS NIFAKILRGE LPAHKVYEDD KAVAFLDIMP RAPGHTLVIP KNPARNILDI
DPEDLAYVAK IAKKVAIAAK AVFAADGVTV QQFNEEAGGQ VVFHLHVHVI PRHAGQAMKP
AASVMEKPEV LAEHAARLKA ALAG
|
|---|
| |