| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3516 |
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| Symbol | |
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| ID | 5421062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3916973 |
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| End bp | 3918586 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640882771 |
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| Product | protease Do |
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| Protein accession | YP_001418402 |
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| Protein GI | 154247444 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.277095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCGC CCATGACCCG CTCGCCCATG ACCCGCTCCG ACAACACCCC CTCCGTGACC
AAGCGCCACC GCAAGGCTCT CCTGGCCGGC GTGGTCGGTC TCGCGCTCGC CGGCGTCGTG
GCCGGCCAGT TCGTGCCGCC GCTGAACGGT CCCGTCGCCG CCCAGATCAC CACCAGCCAG
CCGGCCGGCA CCTTCTCCTT CGCCGATATC GTCGAGAAGG TCTCGCCCGC CGTCGTCTCG
GTGAAGGTGA AGAAGGATGC CGGCAACGAA CAGATGGCCA TGGGCGGCGA TTTCGGCGGC
AATGTTCCGC CCCAGATCGA GCAGTTCCTG AAGCGCTTCG GCTTCGGCGA CGGCCAGGGC
CCCATGGGTC CGGGTGGTCC CGGCGGCCCG GGCATGGGTC CGCGCGGCGG CCACGGTCCC
AAGGGCGAGC GCCCGGTGGT GGGCCAGGGC TCCGGCTTCA TCATCTCGGC TGACGGCTAT
GTGGTGACCA ACAACCACGT GGTGGACGGC GCCGACGAGG TGGACGTGAC CACCACCGAC
GGCAAGGAAT ACCAGGCCAA GGTGATCGGC ACCGATCCGC GCACCGACGT GGCCCTGCTG
AAGATCGAGA ACGTCACCAA CCTGCCGTGG GTGAAGCTCG CGGACGGCGC CCCGCGCGTC
GGTGACTGGG TGATCGCGGT GGGCAATCCC TTCGGCCTCG GCGGCACCGT GACCGCCGGC
ATCGTCTCGG CCCGTGGCCG CGACATTGGC TCGGGTCCCT ATGACGACTT CATCCAGATC
GACGCCCCCA TCAACCGGGG CAATTCGGGC GGCCCGACCT TCTCGCTGAA CGGCGAGGTG
ATCGGCATGA ACACCGCCAT CGTCTCCCCC TCGGGTGGCA ACGTGGGCAT TGCCTTCGCC
ATTCCGTCCG AGACCGTGAA GACGGTGGTG GCCCAGCTGC GCGACAAGGG CTCGGTGGCC
CGCGGCTACA TCGGCGTGCA GATCCAGCCG GTGACCGAGG ACCTCGCCTC CGGCCTCGGC
ATCAAGGACG CCGAGGGCGC CCTGGTGGCG CAGGTTCAGC CCAACACCCC CGGCGCCAAG
GCAGGCCTGA AGGCCGGCGA CGTGATCGTG AAGGTCAACA ACGAGCCGAT CAAGGAAGCC
CGCGATCTGA CCCGCAAGGT GGGCATGATG AAGCCGGGTA CCGAGATCAA GCTCTCGCTG
ATCCGCGATG CCAAGCCCAT GGACCTGTCC CTGGTGCTCG ACCAGCTGCC CAACGATCAG
GTCGCCTCGC GCTCCGGTGC GCCCCAGCAG GGCGAGGATG ACACCGCCGG CGCCACCAAG
GACCTGCCGC GCCTCGGCCT CCAGCTCGCC CCGTCCAAGA GCGTTCAGGG CGCCGGCGGC
GAAGGCGTGG TGGTGACCGG TGTGGAGCCC AACGGCCCCG CCGCCCAGCG CGGTTTCAAG
ACCGGCGACG TGATCCTGAA GGTGGGCGAC AAAGCGGTCT CCACCCCGAA GGATGTGCGC
GACGGCCTCG CCGCCGCCAA GGCCGACAAC CGCAAGGCGG TGCTCATCCA GGTGAAGAGC
GGCGAGGGCG TGCGCTTCGT CGCCATCACC CTCGACGCCA AGGCCAAGGG CTGA
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| Protein sequence | MRPPMTRSPM TRSDNTPSVT KRHRKALLAG VVGLALAGVV AGQFVPPLNG PVAAQITTSQ
PAGTFSFADI VEKVSPAVVS VKVKKDAGNE QMAMGGDFGG NVPPQIEQFL KRFGFGDGQG
PMGPGGPGGP GMGPRGGHGP KGERPVVGQG SGFIISADGY VVTNNHVVDG ADEVDVTTTD
GKEYQAKVIG TDPRTDVALL KIENVTNLPW VKLADGAPRV GDWVIAVGNP FGLGGTVTAG
IVSARGRDIG SGPYDDFIQI DAPINRGNSG GPTFSLNGEV IGMNTAIVSP SGGNVGIAFA
IPSETVKTVV AQLRDKGSVA RGYIGVQIQP VTEDLASGLG IKDAEGALVA QVQPNTPGAK
AGLKAGDVIV KVNNEPIKEA RDLTRKVGMM KPGTEIKLSL IRDAKPMDLS LVLDQLPNDQ
VASRSGAPQQ GEDDTAGATK DLPRLGLQLA PSKSVQGAGG EGVVVTGVEP NGPAAQRGFK
TGDVILKVGD KAVSTPKDVR DGLAAAKADN RKAVLIQVKS GEGVRFVAIT LDAKAKG
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